Merge pull request #6 from MichaelChirico/include-order

Edit #include order for system vs. R headers

man/plot.Intervals.Rd

@@ -27,6 +27,7 @@
      use_points = TRUE,
      use_names = TRUE,
      names_cex = 1,
+     text_col = NULL,
      ...
      )
 
@@ -84,6 +85,10 @@
       TRUE}.
   }
 
+  \item{text_col}{
+    Color of printed labels. Only relevant if \code{use_names = TRUE}.
+  }
+
   \item{...}{Other arguments for \code{\link{plot.default}}.}
 
 }
@@ -149,4 +154,4 @@ x <- Intervals( cbind( left, right ) )
 
 plot(x, use_points=FALSE)
 plot(x, use_points=FALSE, xlim = c(0, 500))
-}
+}

src/Endpoint.h

@@ -1,9 +1,11 @@
 #ifndef ENDPOINT_H
 
 #define ENDPOINT_H
+
+#include <vector>
+
 #include <R.h>
 #include <Rinternals.h>
-#include <vector>
 
 
 

src/plot_overlap.cpp

@@ -1,10 +1,12 @@
-#include <R.h>
-#include <Rinternals.h>
 #include "Endpoint.h"
+
 #include <vector>
 #include <set>
 #include <algorithm>
 
+#include <R.h>
+#include <Rinternals.h>
+
 /*
   What we require to prevent segfaults is the same as for
   interval_overlap.cpp. See details there. Everything should be checked by the

src/reduce.cpp

@@ -1,9 +1,11 @@
-#include <R.h>
-#include <Rinternals.h>
 #include "Endpoint.h"
+
 #include <vector>
 #include <algorithm>
 
+#include <R.h>
+#include <Rinternals.h>
+
 /*
   What we require to prevent segfaults is the same as for
   interval_overlap.cpp. See details there. Everything should be checked by the

src/which_nearest.cpp

@@ -1,11 +1,13 @@
-#include <R.h>
-#include <Rinternals.h>
 #include "Endpoint.h"
+
 #include <limits>
 #include <vector>
 #include <set>
 #include <algorithm>
 
+#include <R.h>
+#include <Rinternals.h>
+
 /*
   #### What we require to prevent segfaults: