This repository has been archived by the owner on Dec 3, 2024. It is now read-only.
Upgraded from KMC 3.1.1 to 3.2.1.
Added --filetype, which is based on the one used by KMC. By default, it is 'fq' for FASTQ.
f<a/q/m/bam/kmc> - input in FASTA format (fa), FASTQ format (fq), multi FASTA (fm) or BAM (fbam) or KMC(fkmc); default: FASTQ.
Also upgraded java and groovy.