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Adds PI-RADS V2.1
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Adds v2.1 (2019) PI-RADS in response to issue ctsit#36. Does not replace original PIRADS maps nor images, adds as a new imagemap.
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@GeeEssEff
GeeEssEff committed Dec 13, 2019
1 parent 74117cb commit 3683cde
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16 changes: 8 additions & 8 deletions README.md
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Expand Up @@ -64,7 +64,12 @@ Representation of a generic female body.

**`PI-RADS`**

![TEETH](./img/pirads.png)
![PIRADS](./img/pirads.png)


**`PI-RADS_V2-1`**

![PI-RADS_V2-1] (./img/pi-rads_v2.1.png)


**`RHEUMATOID_MAN`**
Expand All @@ -90,14 +95,12 @@ Michigan Body Map (MBM) reflects body areas where chronic pain may be experience
![BEES](./img/bees.png)


HEAD

**`DO_TOUCH_NET_BODY_COLOUR`** and **`DO_TOUCH_NET_BODY_GREY`**

DO-Touch.NET body region image map designed for use in osteopathic manipulative medicine (OMM) research.
![DO_TOUCH_NET_BODY_COLOUR](./img/do_touch_net_body_colour.png)
![DO_TOUCH_NET_BODY_GREY](./img/do_touch_net_body_grey.png)
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## Usage
Expand All @@ -112,24 +115,21 @@ To display one of the images above in a survey or data entry form, add a new fie
@IMAGEMAP=TEETH_SURFACE
@IMAGEMAP=TEETH
@IMAGEMAP=PIRADS
@IMAGEMAP=PI-RADS_V2-1
@IMAGEMAP=RHEUMATOID_MAN
@IMAGEMAP=VA_CHART
@IMAGEMAP=MBODY
@IMAGEMAP=BEES
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@IMAGEMAP=DO_TOUCH_NET_BODY_COLOUR
@IMAGEMAP=DO_TOUCH_NET_BODY_GREY
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```

Each region of an image is associated with a key, for example, the "Ankle (front-left)" of the female body diagram is linked to the key "f34". To find a particular key for a body part, please refer to the HTML files (map files) located in the folder `maps`. After selecting multiple body parts, the field containing the action tag `@IMAGEMAP` will have as a value a string of comma-separated keys, e.g. "f36,f17,f18,f21". Similarly, if using the faces diagram, the field containing the action tag (e.g. `@IMAGEMAP=SMILE_SCALE`) will have the value corresponding to the face clicked.


## Testing instrument

HEAD
This project includes an [Example Instrument](docs/Instrument\ Example.zip) that includes each of these image maps. It demonstrates different methods of using these image maps; which is suitable for testing or demonstration purposes.
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## Acknowledgements & Copyright
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19 changes: 13 additions & 6 deletions config.json
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Expand Up @@ -167,6 +167,19 @@
"data_dict_default": "1, 1 | 2, 2 | 3, 3 | 4, 4 | 5, 5 | 6, 6 | 7, 7 | 8, 8 | 9, 9 | 10, 10 | 11, 11 | 12, 12 | 13, 13 | 14, 14 | 15, 15 | 16, 16 | 17, 17 | 18, 18 | 19, 19 | 20, 20 | 21, 21 | 22, 22 | 23, 23 | 24, 24 | 25, 25 | 26, 26 | 27, 27 | 28, 28 | 29, 29 | 30, 30",
"fillColor": "00aa00"
},
"PI-RADS_V2-1": {
"name": "pi-rads_v2-1",
"alt": "PI-RADS v2.1",
"desc": "Prostate imaging - reporting and data system version 2.1 (2019)",
"image": "img/pirads_v2.1.png",
"width": "513",
"height": "631",
"map": "maps/pirads_v2.1.html",
"hideInput": true,
"options": "1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41",
"data_dict_default": "1, Right seminal vesicles | 2, Left seminal vesicles | 3, Right anterior fibromuscular stroma base | 4, Left anterior fibromuscular stroma base | 5, Right anterior peripheral zone base | 6, Left anterior peripheral zone base | 7, Right anterior transition zone base | 8, Left anterior transition zone base | 9, Right lateral posterior peripheral zone base | 10, Left lateral posterior peripheral zone base | 11, Right posterior reansition zone base | 12, Left posterior transition zone base | 13, Right centeral zone base | 14, Left central zone base | 15, Right medial posterior peripheral zone base | 16, Left medial posterior peripheral zone base | 17, Right anterior fibromuscular stroma mid | 18, Left anterior fibromuscular stroma mid | 19, Right anterior peripheral zone mid | 20, Left anterior peripheral zone mid | 21, Right anterior transition zone mid | 22, Left anterior transition zone mid | 23, Right lateral posterior peripheral zone mid | 24, Left lateral posterior peripheral zone mid | 25, Right posterior transition zone mid | 26, Left posterior transition zone mid | 27, Right medial posterior peripheral zone mid | 28, Left medial posterior peripheral zone mid | 29, Right anterior fibromuscular stroma apex | 30, Left anterior fibromuscular stroma apex | 31, Right anterior peripheral zone apex | 32, Left anterior peripheral zone apex | 33, Right anterior transition zone apex | 34, Left anterior transition zone apex | 35, Right lateral posterior peripheral zone apex | 36, Left lateral posterior peripheral zone apex | 37, Right medial posterior peripheral zone apex | 38, Left medial posterior peripheral zone apex | 39, Right posterior transtion zone apex | 40, Left posterior transtion zone apex | 41, External urethral sphincter",
"fillColor": "00aa00"
},
"BEES": {
"name": "improved_pain_scale",
"alt": "Improved Pain Scale",
Expand Down Expand Up @@ -219,15 +232,12 @@
"data_dict_default": "0, 0 | 1, 1 | 2, 2 | 3, 3 | 4, 4 | 5, 5 | 6, 6 | 7, 7 | 8, 8 | 9, 9 | 10, 10 | 11, 11 | 12, 12 | 13, 13 | 14, 14 | 15, 15 | 16, 16 | 17, 17 | 18, 18 | 19, 19 | 20, 20 | 21, 21 | 22, 22 | 23, 23 | 24, 24 | 25, 25 | 26, 26 | 27, 27 | 28, 28 | 29, 29 | 30, 30 | 31, 31 | 32, 32 | 33, 33 | 34, 34 | 35, 35",
"fillColor": "00aa00"
},
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"DO-TOUCH_NET-BODY_COLOUR": {
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"name": "DO-Touch_NET-Body_Colour",
"alt": "DO-Touch_NET bodymap colour",
"desc": "Bodymap for use in Osteopathic Manipulative Treatment research in colour.",
"options": "01,02,03,04,05,06,07,08,09,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59",
"data_dict_default": "01, Face (Front) | 02, Head (Front) | 03, Neck (Front) | 04, Chest-Ribs (Front) | 05, Shoulder (Front Right) | 06, Shoulder (Front Left) | 07, Upper Arm (Front Right) | 08, Upper Arm (Front Left) | 09, Elbow (Front Right) | 10, Elbow (Front Left) | 11, Forearm (Front Right) | 12, Forearm (Front Left) | 13, Wrist (Front Right) | 14, Wrist (Front Left) | 15, Hand (Front Right) | 16, Hand (Front Left) | 17, Abdomen (Front) | 18, Hips-Pelvis (Front) | 19, Thigh (Front Right) | 20, Thigh (Front Left) | 21, Knee (Front Right) | 22, Knee (Front Left) | 23, Shin-Calf (Front Right) | 24, Shin-Calf (Front Left) | 25, Ankle (Front Right) | 26, Ankle (Front Left) | 27, Foot (Front Right) | 28, Foot (Front Left) | 29, Head (Back) | 30, Neck (Back) | 31, Shoulder (Back Left) | 32, Shoulder (Back Right) | 33, Ribs (Back Left) | 34, Ribs (Back Right) | 35, Upper Back (Back) | 36, Upper Arm (Back Left) | 37, Upper Arm (Back Right) | 38, Elbow (Back Left) | 39, Elbow (Back Right) | 40, Forearm (Back Left) | 41, Forearm (Back Right) | 42, Wrist (Back Left) | 43, Wrist (Back Right) | 44, Hand (Back Left) | 45, Hand (Back Right) | 46, Lower Back (Back) | 47, Hip-Pelvis (Back Left) | 48, Hip-Pelvis (Back Right) | 49, Tailbone-Sacrum (Back) | 50, Thigh (Back Left) | 51, Thigh (Back Right) | 52, Knee (Back Left) | 53, Knee (Back Right) | 54, Shin-Calf (Back Left) | 55, Shin-Calf (Back Right) | 56, Ankle (Back Left) | 57, Ankle (Back Right) | 58, Foot (Back Left) | 59, Foot (Back Right)",
HEAD
"image": "img/DO-Touch_NET-Body_colour.png",
"width": 518,
"height": 532,
Expand All @@ -237,21 +247,18 @@
"map": "maps/DO-Touch_NET-Body_colour.html"
},
"DO-TOUCH_NET-BODY_GREY": {
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"name": "DO-Touch_NET-Body_Grey",
"alt": "DO-Touch_NET bodymap grey",
"desc": "Bodymap for use in Osteopathic Manipulative Treatment research in grey.",
"options": "01,02,03,04,05,06,07,08,09,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59",
"data_dict_default": "01, Face (Front) | 02, Head (Front) | 03, Neck (Front) | 04, Chest-Ribs (Front) | 05, Shoulder (Front Right) | 06, Shoulder (Front Left) | 07, Upper Arm (Front Right) | 08, Upper Arm (Front Left) | 09, Elbow (Front Right) | 10, Elbow (Front Left) | 11, Forearm (Front Right) | 12, Forearm (Front Left) | 13, Wrist (Front Right) | 14, Wrist (Front Left) | 15, Hand (Front Right) | 16, Hand (Front Left) | 17, Abdomen (Front) | 18, Hips-Pelvis (Front) | 19, Thigh (Front Right) | 20, Thigh (Front Left) | 21, Knee (Front Right) | 22, Knee (Front Left) | 23, Shin-Calf (Front Right) | 24, Shin-Calf (Front Left) | 25, Ankle (Front Right) | 26, Ankle (Front Left) | 27, Foot (Front Right) | 28, Foot (Front Left) | 29, Head (Back) | 30, Neck (Back) | 31, Shoulder (Back Left) | 32, Shoulder (Back Right) | 33, Ribs (Back Left) | 34, Ribs (Back Right) | 35, Upper Back (Back) | 36, Upper Arm (Back Left) | 37, Upper Arm (Back Right) | 38, Elbow (Back Left) | 39, Elbow (Back Right) | 40, Forearm (Back Left) | 41, Forearm (Back Right) | 42, Wrist (Back Left) | 43, Wrist (Back Right) | 44, Hand (Back Left) | 45, Hand (Back Right) | 46, Lower Back (Back) | 47, Hip-Pelvis (Back Left) | 48, Hip-Pelvis (Back Right) | 49, Tailbone-Sacrum (Back) | 50, Thigh (Back Left) | 51, Thigh (Back Right) | 52, Knee (Back Left) | 53, Knee (Back Right) | 54, Shin-Calf (Back Left) | 55, Shin-Calf (Back Right) | 56, Ankle (Back Left) | 57, Ankle (Back Right) | 58, Foot (Back Left) | 59, Foot (Back Right)",
HEAD
"image": "img/DO-Touch_NET-Body_grey.png",
"width": 518,
"height": 532,
"hideInput": true,
"singleSelect": false,
"fillColor": "0000cc",
"map": "maps/DO-Touch_NET-Body_grey.html"
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},
"VA_CHART": {
"name": "va_chart",
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Binary file added img/pirads_v2.1.png
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42 changes: 42 additions & 0 deletions maps/pirads_v2.1.html
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<!--- PI-Rads_v2.1 --->
<area data-key="1" title="Right seminal vesicles" href="" target="" alt="" shape="poly" coords="400,27,402,27,405,30,404,32,402,35,400,39,399,40,397,42,393,42,389,48,380,58,376,62,374,62,371,65,369,68,364,69,360,70,358,74,355,76,352,76,349,81,344,84,341,85,337,85,331,84,323,80,318,72,320,64,319,60,323,53,324,50,329,44,332,43,337,37,344,33,350,32,353,34,354,30,358,27,365,26,370,28,373,27,377,27,387,27,391,29" />
<area data-key="2" title="Left seminal vesicles" href="" target="" alt="" shape="poly" coords="418,27,416,30,414,32,417,36,418,39,422,42,429,43,431,48,437,54,441,57,444,56,444,59,448,62,454,64,459,66,464,67,464,70,468,73,473,74,477,77,478,78,482,80,490,80,492,79,496,78,501,77,505,71,505,64,503,55,500,47,495,44,488,44,485,38,478,33,473,31,470,32,468,34,467,31,465,29,461,27,453,26,451,28,449,28,447,27,438,26,434,27,430,29,425,27,422,27" />
<area data-key="3" title="Right anterior fibromuscular stroma base" href="" target="" alt="" shape="poly" coords="409,143,410,121,411,114,411,107,388,110,361,119,346,133,339,143,343,144,347,148,349,155,355,142,362,129,367,126,377,120,382,118,389,119,396,123,402,128,405,134" />
<area data-key="4" title="Left anterior fibromuscular stroma base" href="" target="" alt="" shape="poly" coords="411,106,412,113,414,118,415,126,415,142,416,144,419,138,424,129,428,124,435,120,441,119,450,121,457,125,463,131,469,139,474,147,477,158,482,145,485,143,488,143,481,133,471,123,455,114,433,108" />
<area data-key="5" title="Right anterior peripheral zone base" href="" target="" alt="" shape="poly" coords="338,143,335,149,332,156,328,170,326,181,325,189,326,192,360,181,349,155,347,150,345,146,342,144" />
<area data-key="6" title="Left anterior peripheral zone base" href="" target="" alt="" shape="poly" coords="487,143,491,149,496,160,499,169,502,177,503,188,503,192,470,181,477,159,481,149,482,145,485,144" />
<area data-key="7" title="Right anterior transition zone base" href="" target="" alt="" shape="poly" coords="360,180,413,181,412,172,410,170,409,165,409,155,409,142,404,133,401,127,392,121,385,119,382,118,363,129,359,135,349,155" />
<area data-key="8" title="Left anterior transition zone base" href="" target="" alt="" shape="poly" coords="413,181,469,180,477,158,473,147,469,140,464,133,460,129,456,125,449,122,442,120,435,120,429,124,426,126,420,138,416,144,415,170,413,172" />
<area data-key="9" title="Right lateral posterior peripheral zone base" href="" target="" alt="" shape="poly" coords="325,192,360,182,380,239,371,239,361,236,348,231,340,226,332,218,328,209,325,201" />
<area data-key="10" title="Left lateral posterior peripheral zone base" href="" target="" alt="" shape="poly" coords="452,238,470,182,504,192,502,202,497,216,490,224,484,229,471,235,460,238" />
<area data-key="11" title="Right posterior reansition zone base" href="" target="" alt="" shape="poly" coords="412,181,412,197,380,197,371,196,364,192,360,182" />
<area data-key="12" title="Left posterior transition zone base" href="" target="" alt="" shape="poly" coords="468,182,412,182,413,197,452,196,459,195,464,194" />
<area data-key="13" title="Right centeral zone base" href="" target="" alt="" shape="poly" coords="412,197,412,239,407,238,398,235,389,229,378,218,369,204,365,193,372,197,380,197,410,198" />
<area data-key="14" title="Left central zone base" href="" target="" alt="" shape="poly" coords="413,198,413,240,422,239,433,234,443,226,454,216,459,205,465,194,451,197,413,197" />
<area data-key="15" title="Right medial posterior peripheral zone base" href="" target="" alt="" shape="poly" coords="411,240,398,236,387,228,378,220,369,205,380,238,392,240" />
<area data-key="16" title="Left medial posterior peripheral zone base" href="" target="" alt="" shape="poly" coords="413,240,445,240,451,237,464,197,461,201,455,216,450,221,439,230,434,234,426,238,422,239" />
<area data-key="17" title="Right anterior fibromuscular stroma mid" href="" target="" alt="" shape="poly" coords="411,324,412,284,404,283,394,286,378,292,367,299,371,300,372,307,382,301,394,298,401,300,407,307,407,308" />
<area data-key="18" title="Left anterior fibromuscular stroma mid" href="" target="" alt="" shape="poly" coords="413,284,414,323,415,323,418,313,422,305,431,300,440,300,446,301,452,305,452,299,455,297,449,294,441,290,432,286,419,284" />
<area data-key="19" title="Right anterior peripheral zone mid" href="" target="" alt="" shape="poly" coords="366,299,370,300,371,307,365,315,360,323,357,328,356,334,356,342,357,352,334,352,335,342,340,331,345,320,356,309" />
<area data-key="20" title="Left anterior peripheral zone mid" href="" target="" alt="" shape="poly" coords="456,298,453,299,452,305,456,309,461,314,464,318,467,324,468,329,470,339,470,348,469,352,490,352,489,343,485,331,477,319,469,309,458,299" />
<area data-key="21" title="Right anterior transition zone mid" href="" target="" alt="" shape="poly" coords="410,335,410,323,406,307,400,301,394,299,383,301,371,308,365,316,357,329,356,343,358,351,407,352,411,340,410,338" />
<area data-key="22" title="Left anterior transition zone mid" href="" target="" alt="" shape="poly" coords="415,324,422,306,431,301,443,302,453,307,463,318,468,334,469,346,468,351,419,352,416,342,415,326" />
<area data-key="23" title="Right lateral posterior peripheral zone mid" href="" target="" alt="" shape="poly" coords="334,353,358,353,375,411,366,407,358,404,347,396,339,383,335,365" />
<area data-key="24" title="Left lateral posterior peripheral zone mid" href="" target="" alt="" shape="poly" coords="451,408,468,353,490,353,489,363,487,372,485,382,481,388,473,398,465,404,458,407" />
<area data-key="25" title="Right posterior transition zone mid" href="" target="" alt="" shape="poly" coords="406,352,359,352,363,367,368,373,378,377,388,375,398,368,402,362" />
<area data-key="26" title="Left posterior transition zone mid" href="" target="" alt="" shape="poly" coords="419,353,467,352,464,364,458,371,451,376,443,376,435,374,427,368" />
<area data-key="27" title="Right medial posterior peripheral zone mid" href="" target="" alt="" shape="poly" coords="363,368,376,411,393,413,412,414,412,376,408,375,404,372,404,366,399,370,398,369,388,376,377,378,367,373" />
<area data-key="28" title="Left medial posterior peripheral zone mid" href="" target="" alt="" shape="poly" coords="413,414,413,377,418,374,421,371,421,368,420,366,425,369,427,368,431,372,436,375,443,377,451,377,458,372,464,366,450,410,437,412,430,413,420,414" />
<area data-key="29" title="Right anterior fibromuscular stroma apex" href="" target="" alt="" shape="poly" coords="412,452,413,493,411,493,408,483,403,478,399,477,391,480,391,474,391,469,388,464,382,462,380,463,388,458,396,454" />
<area data-key="30" title="Left anterior fibromuscular stroma apex" href="" target="" alt="" shape="poly" coords="413,492,414,453,424,454,431,456,438,460,443,463,438,463,436,467,434,473,434,477,436,482,435,482,430,478,425,476,419,478,417,481,416,492" />
<area data-key="31" title="Right anterior peripheral zone apex" href="" target="" alt="" shape="poly" coords="380,463,388,465,390,469,390,480,386,486,383,492,354,501,357,492,363,479,377,466" />
<area data-key="32" title="Left anterior peripheral zone apex" href="" target="" alt="" shape="poly" coords="445,464,438,463,436,469,435,476,438,483,441,492,470,502,466,489,459,477" />
<area data-key="33" title="Right anterior transition zone apex" href="" target="" alt="" shape="poly" coords="385,491,410,492,408,484,404,479,399,477,391,480,387,485" />
<area data-key="34" title="Left anterior transition zone apex" href="" target="" alt="" shape="poly" coords="416,492,440,492,436,484,429,479,425,477,420,479,418,481,417,485" />
<area data-key="35" title="Right lateral posterior peripheral zone apex" href="" target="" alt="" shape="poly" coords="353,502,368,498,386,555,386,556,378,556,373,556,367,552,362,545,358,539,356,532,353,522" />
<area data-key="36" title="Left lateral posterior peripheral zone apex" href="" target="" alt="" shape="poly" coords="457,498,471,503,472,510,471,519,470,530,466,538,463,545,458,551,450,556,446,556,440,556,439,556" />
<area data-key="37" title="Right medial posterior peripheral zone apex" href="" target="" alt="" shape="poly" coords="369,497,384,493,382,500,382,509,387,517,392,522,401,527,408,527,412,521,412,552,406,552,398,553,392,555,387,555" />
<area data-key="38" title="Left medial posterior peripheral zone apex" href="" target="" alt="" shape="poly" coords="412,521,414,552,421,551,428,553,438,553,457,498,441,493,444,500,443,510,440,516,432,523,425,526,421,528,418,528" />
<area data-key="39" title="Right posterior transtion zone apex" href="" target="" alt="" shape="poly" coords="384,492,409,492,411,500,410,509,407,515,402,519,396,520,391,520,385,515,382,509" />
<area data-key="40" title="Left posterior transtion zone apex" href="" target="" alt="" shape="poly" coords="415,493,414,501,416,508,418,513,421,517,430,520,437,518,442,512,443,501,442,496,439,492" />
<area data-key="41" title="External urethral sphincter" href="" target="" alt="" shape="poly" coords="414,586,408,586,405,591,404,595,406,598,408,601,414,602,420,600,422,595,421,589" />

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