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Drug-Gene Interaction Database (DGIdb)

Public repositories for the DGIdb project

Welcome to the Drug-Gene Interaction Database!

The Drug–Gene Interaction Database (DGIdb) aggregates human genes, drugs, gene products, drugs and drug–gene interaction records to drive hypothesis generation and discovery for clinicians and researchers. Using a combination of expert curation and text-mining, interactions and drug categorizations are drawn from resources like DrugBank, PharmGKB, ChEMBL, the Gene Ontology, and the Human Protein Atlas. Presently, DGIdb contains over 10,000 genes and 20,000 drugs involved in nearly 70,000 drug-gene interactions.


For more information, please see our most recent publication:

Matthew Cannon, James Stevenson, Kathryn Stahl, Rohit Basu, Adam Coffman, Susanna Kiwala, Joshua F McMichael, Kori Kuzma, Dorian Morrissey, Kelsy Cotto, Elaine R Mardis, Obi L Griffith, Malachi Griffith, Alex H Wagner, DGIdb 5.0: rebuilding the drug–gene interaction database for precision medicine and drug discovery platforms, Nucleic Acids Research, Volume 52, Issue D1, 5 January 2024, Pages D1227–D1235, https://doi.org/10.1093/nar/gkad1040

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  1. dgidb dgidb Public

    Rails frontend to The Genome Institute's drug gene interaction database.

    Ruby 95 32

Repositories

Showing 6 of 6 repositories
  • .github Public

    Project content for the DGIdb organization

    dgidb/.github’s past year of commit activity
    0 MIT 1 0 0 Updated Jan 31, 2025
  • dgidb-v5 Public

    Providing interactions between drugs and genes sourced from a variety of publications and knowledgebases

    dgidb/dgidb-v5’s past year of commit activity
    Ruby 22 MIT 4 89 (4 issues need help) 2 Updated Jan 28, 2025
  • dgidb/dgidb-citation-analysis’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Jan 27, 2025
  • r-dgidb Public

    In-progress R wrapper for DGIdb

    dgidb/r-dgidb’s past year of commit activity
    R 1 0 3 1 Updated Jan 20, 2025
  • dgipy Public

    Python client for fast access to the Drug-Gene Interaction Database (DGIDb)

    dgidb/dgipy’s past year of commit activity
    Python 1 MIT 0 14 1 Updated Jan 20, 2025
  • dgidb Public

    Rails frontend to The Genome Institute's drug gene interaction database.

    dgidb/dgidb’s past year of commit activity
    Ruby 95 MIT 32 54 11 Updated Mar 8, 2023

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