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0.10.3 readme fixed all links
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david-barnett committed Nov 18, 2022
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4 changes: 2 additions & 2 deletions README.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -55,9 +55,9 @@ If you were already using microViz prior to version 0.10.0 please read [this doc

- [**This ReadMe**](https://david-barnett.github.io/microViz/) shows a few example analyses

- **The [Reference](reference/index.html) page** lists all functions and links to help pages and examples
- **[The Reference page](https://david-barnett.github.io/microViz/reference/index.html)** lists all functions and links to help pages and examples

- **The [Changelog](news/index.html)** describes important changes in new microViz package versions
- **[The News page](https://david-barnett.github.io/microViz/news/index.html)** describes important changes in new microViz package versions

- **The Articles pages** give tutorials and further examples

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18 changes: 10 additions & 8 deletions README.md
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Expand Up @@ -49,11 +49,13 @@ examples: <https://david-barnett.github.io/microViz/>
- [**This ReadMe**](https://david-barnett.github.io/microViz/) shows a
few example analyses

- **The [Reference](reference/index.html) page** lists all functions and
links to help pages and examples
- **[The Reference
page](https://david-barnett.github.io/microViz/reference/index.html)**
lists all functions and links to help pages and examples

- **The [Changelog](news/index.html)** describes important changes in
new microViz package versions
- **[The News
page](https://david-barnett.github.io/microViz/news/index.html)**
describes important changes in new microViz package versions

- **The Articles pages** give tutorials and further examples

Expand Down Expand Up @@ -334,8 +336,8 @@ aitchison_perm <- aitchison_dists %>%
n_processes = 1, n_perms = 99, # you should use at least 999!
variables = "bmi_group"
)
#> 2022-11-18 12:18:02 - Starting PERMANOVA with 99 perms with 1 processes
#> 2022-11-18 12:18:02 - Finished PERMANOVA
#> 2022-11-18 12:52:45 - Starting PERMANOVA with 99 perms with 1 processes
#> 2022-11-18 12:52:45 - Finished PERMANOVA

# view the permanova results
perm_get(aitchison_perm) %>% as.data.frame()
Expand All @@ -360,8 +362,8 @@ your permanova directly using the `ord_plot` function with constraints
perm2 <- aitchison_dists %>%
dist_permanova(variables = c("weight", "african", "sex"), seed = 321)
#> Dropping samples with missings: 2
#> 2022-11-18 12:18:02 - Starting PERMANOVA with 999 perms with 1 processes
#> 2022-11-18 12:18:04 - Finished PERMANOVA
#> 2022-11-18 12:52:45 - Starting PERMANOVA with 999 perms with 1 processes
#> 2022-11-18 12:52:47 - Finished PERMANOVA
```

We’ll visualise the effect of nationality and bodyweight on sample
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