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Top Down Arabidopsis Tray (Multi-Plant)

Check out our interactive Arabidopsis multi-plant tutorial! Learn how to extract trait information from individual plants imaged in a tray.

Binder Colab

Tutorial tags/keywords

plant shoot, multi-plant, RGB, shape analysis, arabidopsis, tray, germination rate, growth rate

Citations

Gehan MA, Fahlgren N, Abbasi A, Berry JC, Callen ST, Chavez L, Doust AN, Feldman MJ, Gilbert KB, Hodge JG, Hoyer JS, Lin A, Liu S, Lizárraga C, Lorence A, Miller M, Platon E, Tessman M, Sax T. 2017. PlantCV v2: Image analysis software for high-throughput plant phenotyping. PeerJ 5:e4088. DOI: 10.7717/peerj.4088.

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Tutorial for analyzing top-down trays of plants with PlantCV

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