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D3b

Center for Data Driven Discovery in Biomedicine at the Children's Hospital of Philadelphia

28 followers
Philadelphia, PA
http://d3b.center

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bixtools bixtools Public

🐳 Dockerfiles for bioinformatics tools

Dockerfile 17 4

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Showing 10 of 149 repositories

pediatric-auto-defacer-public Public
Release of pretrained pediatric de-facing model for MRI file de-identification

d3b-center/pediatric-auto-defacer-public’s past year of commit activity

2 0 0 0 Updated Aug 1, 2025
d3b-flywheel-routine-empty-containers Public
Routine QC job for data hosted on Flywheel

d3b-center/d3b-flywheel-routine-empty-containers’s past year of commit activity

Python 0 0 0 0 Updated Jul 30, 2025
image-deid-etl Public
A WIP tool to assist with reading DICOM images from Orthanc, conversion to anonymized NIfTI images, and uploading to Flywheel.

d3b-center/image-deid-etl’s past year of commit activity

Python 5 Apache-2.0 0 22 0 Updated Jul 30, 2025
tap-jira Public Forked from MeltanoLabs/tap-jira

d3b-center/tap-jira’s past year of commit activity

Python 0 26 0 0 Updated Jul 29, 2025
celllines-profiling-analysis Public
Stemness analysis in HGG Suspension vs Adhesion cell lines

d3b-center/celllines-profiling-analysis’s past year of commit activity

R 3 0 0 0 Updated Jul 29, 2025
fw-move-session-to-proj Public
Flywheel gear to move session to a destination project

d3b-center/fw-move-session-to-proj’s past year of commit activity

Python 0 0 0 0 Updated Jul 11, 2025
bixtools Public
🐳 Dockerfiles for bioinformatics tools

d3b-center/bixtools’s past year of commit activity

Dockerfile 17 4 0 0 Updated Jul 10, 2025
terraform-aws-vpc Public
A Terraform module to create anAmazon Web Services (AWS) Virtual Private Cloud (VPC).

d3b-center/terraform-aws-vpc’s past year of commit activity

HCL 0 0 0 1 Updated Jul 10, 2025
OpenPedCan-analysis Public Forked from AlexsLemonade/OpenPBTA-analysis
The analysis repository for the Open Pediatric Cancer Project

d3b-center/OpenPedCan-analysis’s past year of commit activity

HTML 23 85 3 0 Updated Jul 9, 2025
fw-binarize-image Public
Flywheel gear for binarizing an image

d3b-center/fw-binarize-image’s past year of commit activity

Python 0 0 0 0 Updated Jul 7, 2025

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