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Instance Segmentation Experiments #168

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@anwai98 anwai98 commented Nov 14, 2023

This PR focuses on hover-net style training setup for the livecell instance segmentation using UNETR (WIP)

@anwai98 anwai98 marked this pull request as ready for review November 28, 2023 11:48
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anwai98 commented Dec 1, 2023

Hi @constantinpape,
The code for making use of the HoVerNet scripts is here. I wrote up a brief snippet on how to run this here. Thanks!

@anwai98 anwai98 marked this pull request as draft December 1, 2023 16:30
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anwai98 commented Dec 4, 2023

This PR is now split into different versions now (the mentioned improvements for the dist trafo for HoVerNet have been noted as well). I will close it now!

@anwai98 anwai98 closed this Dec 4, 2023
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