Release 2.1.0
- Use the latest versions of samtools and picard by default.
- Add a
reports
output for use in downstream pipelines. - Move
collectAlignmentSummaryMetrics
&meanQualityByCycle
to top level
workflow so they can be set to false for TALON-WDL pipeline. - Tasks were updated to contain the
time_minutes
runtime attribute and
associatedtimeMinutes
input, describing the maximum time the task will
take to run.