removing --quantMode GeneCounts form STAR

biocorecrg · Aug 5, 2019 · 2e5d4ba · 2e5d4ba
1 parent 4ac26c0
commit 2e5d4ba
Showing 1 changed file with 0 additions and 1 deletion.
diff --git a/lib/NGSaligner.groovy b/lib/NGSaligner.groovy
@@ -147,7 +147,6 @@
                   --outSAMunmapped None \
                   --outSAMtype BAM SortedByCoordinate \
                   --runThreadN ${this.cpus} \
-                  --quantMode GeneCounts \
                   --outFileNamePrefix ${this.id} \
                   ${this.extrapars}