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Pull requests: biobakery/kneaddata

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Pull requests list

fix: handle TRF processing for sequences fewer than total processes
#46 opened Feb 12, 2025 by Bluetea577 Loading…
3
Update setup.py URL references to TRF_exe download
#44 opened Nov 11, 2024 by Kborg000 Loading…
Make kneaddata_database use https URLs
#42 opened Mar 21, 2024 by Pandapip1 Loading…
2
illumina paired end files may have 1:N:0 and 2:N:0
#38 opened Sep 3, 2022 by EacoChen Loading…
2
remove_file improvement
#33 opened Apr 29, 2022 by valentynbez Loading…
Fix exception when scanning small fastq files
#28 opened Oct 19, 2021 by zwets Loading…
5
Fix regression introduced by fix for issue #25.
#27 opened Oct 19, 2021 by zwets Loading…
Fix failure in tandem when trim bypassed
#22 opened Aug 16, 2021 by zwets Loading…
1
Fix file name in error message 'Unable to write file'
#21 opened Aug 16, 2021 by zwets Loading…
Use read pairing information in kneaddata_bowtie2_discordant_pairs
#16 opened Feb 17, 2021 by wbazant Loading…
2
Develop/bug trim space and fix pair identifiers
#10 opened Sep 16, 2020 by sagun98 Loading…
ProTip! Exclude everything labeled bug with -label:bug.