Doing genomics and bioinformatics at Adam Mickiewicz University
Highlights
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pairwise-sequence-alignment Public
A Python module to calculate alignment between two sequences using EMBOSS' needle, stretcher, and water
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Code, data, and results for Vclust applied to the ICTV Taxonomy Challenge
Python MIT License UpdatedFeb 15, 2025 -
fastapy Public
A lightweight Python module to read and write FASTA sequence records
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unique-namer Public
Generate unique and memorable names and ids across various categories
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statistical-distance Public
Measures of distance between two probability density functions
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pfam_scan Public
A tool for scanning FASTA protein sequences against a library of Pfam HMMs
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genome-dereplicator Public
A tool for clustering of highly similar genome sequences
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phirbo Public
Predict prokaryotic hosts for phage (meta) genomic sequences