Docker support added

Dockerfile

@@ -0,0 +1,43 @@
+# Use the latest LTS version of Ubuntu as the base image
+FROM ubuntu:22.04
+
+# Set environment variables to prevent prompts during package installation
+ENV DEBIAN_FRONTEND=noninteractive
+
+# Update package list and install necessary packages
+RUN apt-get update && apt-get install -y \
+    gfortran \
+    mpich \
+    libblas-dev \
+    wget \
+    git \
+    make \
+    vim \
+    unzip \
+    && apt-get clean && rm -rf /var/lib/apt/lists/*
+
+# Set a working directory inside the container
+WORKDIR /workspace
+
+# Create a bin directory
+RUN mkdir -p /workspace/bin
+RUN echo 'export PATH="$PATH:/workspace/bin"' >> /root/.bashrc
+
+# Download the specified file
+RUN wget https://www.ssisc.org/lis/dl/lis-2.1.6.zip
+
+# Unzip the downloaded file
+RUN unzip lis-2.1.6.zip && rm lis-2.1.6.zip
+
+# Install LIS library
+RUN cd lis-2.1.6  && ./configure --enable-mpi --enable-f90 && make && make install 
+
+# Download Andromeda
+RUN git clone https://github.com/WildSmilodon/Andromeda.git
+
+# Compile Andromeda
+RUN cd Andromeda/src && make
+RUN cp Andromeda/bin/Andromeda bin/Andromeda-1.7-o
+
+# Default command to start a bash shell
+CMD ["/bin/bash"]

README.md

@@ -12,10 +12,12 @@ doi:10.1016/j.enganabound.2020.11.010
 
 * Anna Šušnjara, Ožbej Verhnjak, Dragan Poljak, Mario Cvetković, Jure Ravnik (2022). Uncertainty quantification and sensitivity analysis of transcranial electric stimulation for 9-subdomain human head model. Engineering Analysis with Boundary Elements (2022), Vol 135, Pages 1-11, doi:10.1016/j.enganabound.2021.10.026
 
-* Jure Ravnik, Mitja Štrakl, Jana Wedel, Paul Sterinamnn, Matjaž Hriberšek: Stokes Flow Induced Drag and Torque on Asbestos Particles can not be estimated by a Simplistic Ellipsoidal Approximation, to appear in 2022
+* J. Ravnik, M. Štrakl, J. Wedel, M. Steinmann, M. Hriberšek. (2022). Stokes flow induced drag and torque on asbestos like fibres cannot be estimated by a simplistic ellipsoidal approximation WIT Transactions on Engineering Sciences, vol. 134, pp. 33 - 44; doi:10.2495/BE450031
 
 * Štrakl, M., Hriberšek, M., Wedel, J., Steinmann, P., Ravnik, J. (2022). A Model for Translation and Rotation Resistance Tensors for Superellipsoidal Particles in Stokes Flow. J. Mar. Sci. Eng. 2022, 10, 369. doi:10.3390/jmse10030369
 
+* J. Ravnik (2023). Analytical expressions for singular integrals arising from the 3D Laplace and Stokes kernels when using constant or linear triangular and quadrilateral boundary elements. Engineering Analysis with Boundary Elements, Volume 154, September 2023, Pages 47-53. doi:10.1016/j.enganabound.2023.02.057
+
 ### Uses LIS, blas and mpich libraries, compiles under gfortran
 
 ```
@@ -73,4 +75,20 @@ sudo apt-get install gmsh
 
 ### Getting help
 
-* running Andromeda with ```-h``` command line argument displays help.
+* running Andromeda with ```-h``` command line argument displays help.
+
+### Docker
+
+To make a docker image of Andromeda, using the Dockerfile provided, run
+
+Build
+
+```docker build -t andromeda .```
+
+Run
+
+```docker run -it andromeda```
+
+To have access to a folder from inside docker
+
+```docker run -v $(pwd)/my_files:/workspace/data -it andromeda```

src/Andromeda.f90

@@ -20,7 +20,7 @@ program Andromeda
 !
       parIDname='Andromeda'
       parIDversion='1.7' 
-      parIDdate='November 2024'
+      parIDdate='February 2025'
 !
 !     Init parallel environment
 !      
@@ -56,7 +56,6 @@ program Andromeda
 !
 !     Write mesh stats to log file
 !
-
       CALL PrintMeshStats()
 !
 !     Read subdomain definitions from BIC file