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Fix/unbalanced_rxns#222

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BenjaSanchez merged 16 commits intodevelSysBioChalmers/yeast-GEM:develfrom fix/unbalanced_rxnsSysBioChalmers/yeast-GEM:fix/unbalanced_rxnsCopy head branch name to clipboardJun 12, 2020

+6,295-2,267

Commits

Commits on May 26, 2020

• feat: automatic curation of reactions via MetaNetX reac_prop.tsv

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Commits on May 27, 2020

• fix-rxn: balance reaction via modification of metabolite formula and charges

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• fix-rxn: balance reaction via modification of model.S

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• fix: remove requirement of coenzyme A in biomass equation for anaerobic model

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• Merge branch 'devel' into fix/unbalanced_rxns

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• fix: cd to the right filefolder

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• style: remove repetitive codes

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Commits on May 29, 2020

• doc: add description for output

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• fix: indexing issues when updating model.S

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• fix: -R4 in TRX1

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Commits on Jun 1, 2020

• fix: resolve unbalanced rxns due to H+/H2O

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Commits on Jun 5, 2020

• fix-bug for wrong mets in the readme

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• chore-cd to the right folder

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• feat-update the model with the balance of H+/H2O

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Commits on Jun 7, 2020

• doc: rename to avoid conflict with COBRA function

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• feat: display_rxnMetInfo.m to facilitate curation of reaction balance

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