Update add_conc.m

SysBioChalmers · Mar 6, 2024 · 9bbc2ae · 9bbc2ae
1 parent 3b7ae52
commit 9bbc2ae
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/add_conc/code/add_conc.m b/add_conc/code/add_conc.m
@@ -1,3 +1,4 @@
+% load model and YMDB data
 modelWithConc = importModel('../../model/yeast-GEM.xml');
 data = readtable('../data/allConcData.xlsx');
 data = table2cell(data);
@@ -7,7 +8,6 @@
 
 met.name = modelWithConc.metNames;
 met.kegg = {};
-
 for i = 1:length(met.name)
     idx = find(strcmp('kegg.compound',modelWithConc.metMiriams{i, 1}.name));
     if idx
@@ -16,12 +16,12 @@
     clear idx
 end
 
+% add conc into model
 metWithConc = {};
 for j = 2:870
     keggId = data{2, j};
     idx = find(strcmp(keggId, met.kegg));
     if idx
-        %fprintf(keggId)
         metWithConc{end+1} = keggId;
         for id= 1:length(idx)
             metConc.allConc{idx(id), 1} = data{3, j};