Skip to content

Commit

Permalink
Minor fixes.
Browse files Browse the repository at this point in the history
  • Loading branch information
@haowang-bioinfo
haowang-bioinfo committed Jan 11, 2018
1 parent d01cfe1 commit 63562e2
Showing 1 changed file with 5 additions and 5 deletions.
10 changes: 5 additions & 5 deletions README.md
View file
Original file line number Diff line number Diff line change
Expand Up @@ -32,19 +32,19 @@ This repository is administered by Hao Wang ([@SysBioChalmers](https://github.co

### Required Software:

* A functional Matlab installation (MATLAB 7.3 or higher)
* A functional Matlab installation (MATLAB 7.3 or higher).
* The model was developed and also recommended to be used with the [RAVEN](https://github.com/SysBioChalmers/RAVEN) Toolbox ver 2.0 for MATLAB.
* An up-to-date version from COBRA GitHub repository is strongly recommended.
* Add the directories to your Matlab path, instructions [here](https://se.mathworks.com/help/matlab/ref/addpath.html?requestedDomain=www.mathworks.com)
* Add the directories to your Matlab path, instructions [here](https://se.mathworks.com/help/matlab/ref/addpath.html?requestedDomain=www.mathworks.com).

### Dependencies - Recommended Software:
* libSBML MATLAB API ([version 5.13.0](https://sourceforge.net/projects/sbml/files/libsbml/5.13.0/stable/MATLAB%20interface/) is recommended).
* [Gurobi Optimizer for MATLAB](http://www.gurobi.com/registration/download-reg).


### Installation Instructions
* Clone [Streptomyces_coelicolor](https://github.com/SysBioChalmers/Streptomyces_coelicolor-GEM) from [SysBioChalmers GitHub](https://github.com/SysBioChalmers)
* Add the directory to your Matlab path, instructions [here](https://se.mathworks.com/help/matlab/ref/addpath.html?requestedDomain=www.mathworks.com)
* Clone the [master](https://github.com/SysBioChalmers/Streptomyces_coelicolor-GEM) branch from [SysBioChalmers GitHub](https://github.com/SysBioChalmers).
* Add the directory to your Matlab path, instructions [here](https://se.mathworks.com/help/matlab/ref/addpath.html?requestedDomain=www.mathworks.com).


## Contributors
Expand Down Expand Up @@ -73,4 +73,4 @@ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
SOFTWARE.
SOFTWARE.

0 comments on commit 63562e2

Please sign in to comment.