Rename algo templates files and folders (#101)

* [DLMED] rename files and folders Signed-off-by: Nic Ma <[email protected]> * [DLMED] remove PNG picture Signed-off-by: Nic Ma <[email protected]> Signed-off-by: Nic Ma <[email protected]>
Project-MONAI · Sep 5, 2022 · 8387fea · 8387fea
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diff --git a/auto3dseg/algorithm_templates/SwinUNETR/docs/img/swin_unetr.png b/auto3dseg/algorithm_templates/SwinUNETR/docs/img/swin_unetr.png
diff --git a/...s/segresnet/configs/hyper_parameters.yaml → ...s/segresnet/configs/hyper_parameters.yaml b/...s/segresnet/configs/hyper_parameters.yaml → ...s/segresnet/configs/hyper_parameters.yaml
diff --git a/..._templates/segresnet/configs/network.yaml → ..._templates/segresnet/configs/network.yaml b/..._templates/segresnet/configs/network.yaml → ..._templates/segresnet/configs/network.yaml
diff --git a/...s/segresnet/configs/transforms_infer.yaml → ...s/segresnet/configs/transforms_infer.yaml b/...s/segresnet/configs/transforms_infer.yaml → ...s/segresnet/configs/transforms_infer.yaml
diff --git a/...s/segresnet/configs/transforms_train.yaml → ...s/segresnet/configs/transforms_train.yaml b/...s/segresnet/configs/transforms_train.yaml → ...s/segresnet/configs/transforms_train.yaml
diff --git a/...egresnet/configs/transforms_validate.yaml → ...egresnet/configs/transforms_validate.yaml b/...egresnet/configs/transforms_validate.yaml → ...egresnet/configs/transforms_validate.yaml
diff --git a/...g/algo_templates/segresnet/docs/README.md → ...orithm_templates/segresnet/docs/README.md b/...g/algo_templates/segresnet/docs/README.md → ...orithm_templates/segresnet/docs/README.md
diff --git a/...o_templates/segresnet/scripts/__init__.py → ...m_templates/segresnet/scripts/__init__.py b/...o_templates/segresnet/scripts/__init__.py → ...m_templates/segresnet/scripts/__init__.py
diff --git a/.../algo_templates/segresnet/scripts/algo.py → ...rithm_templates/segresnet/scripts/algo.py b/.../algo_templates/segresnet/scripts/algo.py → ...rithm_templates/segresnet/scripts/algo.py
diff --git a/...plates/segresnet/scripts/flow_cosinelr.py → ...plates/segresnet/scripts/flow_cosinelr.py b/...plates/segresnet/scripts/flow_cosinelr.py → ...plates/segresnet/scripts/flow_cosinelr.py
diff --git a/...algo_templates/segresnet/scripts/infer.py → ...ithm_templates/segresnet/scripts/infer.py b/...algo_templates/segresnet/scripts/infer.py → ...ithm_templates/segresnet/scripts/infer.py
diff --git a/.../algo_templates/segresnet/scripts/loss.py → ...rithm_templates/segresnet/scripts/loss.py b/.../algo_templates/segresnet/scripts/loss.py → ...rithm_templates/segresnet/scripts/loss.py
diff --git a/...algo_templates/segresnet/scripts/train.py → ...ithm_templates/segresnet/scripts/train.py b/...algo_templates/segresnet/scripts/train.py → ...ithm_templates/segresnet/scripts/train.py
diff --git a/...algo_templates/segresnet/scripts/utils.py → ...ithm_templates/segresnet/scripts/utils.py b/...algo_templates/segresnet/scripts/utils.py → ...ithm_templates/segresnet/scripts/utils.py
diff --git a/...o_templates/segresnet/scripts/validate.py → ...m_templates/segresnet/scripts/validate.py b/...o_templates/segresnet/scripts/validate.py → ...m_templates/segresnet/scripts/validate.py
diff --git a/...s/SwinUNETR/configs/hyper_parameters.yaml → ...s/swinunetr/configs/hyper_parameters.yaml b/...s/SwinUNETR/configs/hyper_parameters.yaml → ...s/swinunetr/configs/hyper_parameters.yaml
diff --git a/..._templates/SwinUNETR/configs/network.yaml → ..._templates/swinunetr/configs/network.yaml b/..._templates/SwinUNETR/configs/network.yaml → ..._templates/swinunetr/configs/network.yaml
diff --git a/...s/SwinUNETR/configs/transforms_infer.yaml → ...s/swinunetr/configs/transforms_infer.yaml b/...s/SwinUNETR/configs/transforms_infer.yaml → ...s/swinunetr/configs/transforms_infer.yaml
diff --git a/...s/SwinUNETR/configs/transforms_train.yaml → ...s/swinunetr/configs/transforms_train.yaml b/...s/SwinUNETR/configs/transforms_train.yaml → ...s/swinunetr/configs/transforms_train.yaml
diff --git a/...winUNETR/configs/transforms_validate.yaml → ...winunetr/configs/transforms_validate.yaml b/...winUNETR/configs/transforms_validate.yaml → ...winunetr/configs/transforms_validate.yaml
diff --git a/...orithm_templates/SwinUNETR/docs/README.md → ...orithm_templates/swinunetr/docs/README.md b/...orithm_templates/SwinUNETR/docs/README.md → ...orithm_templates/swinunetr/docs/README.md
@@ -5,16 +5,13 @@ A 3D Swin Transformer-based algorithm for volumetric segmentation of medical ima
 # Model Overview
 
 This model is the auto 3d implementation [1] with Beyond the Cranial Vault (BTCV) Segmentation Challenge and the "Medical Segmentation Decathlon Challenge 2018" data.
-![image](./img/swin_unetr.png)
-
 
 ## Training configuration
 
 The training was performed with at least 16GB-memory GPUs.
 
 ## commands example
 
-
 Execute model training:
 
 ```

diff --git a/...m_templates/SwinUNETR/scripts/__init__.py → ...m_templates/swinunetr/scripts/__init__.py b/...m_templates/SwinUNETR/scripts/__init__.py → ...m_templates/swinunetr/scripts/__init__.py
diff --git a/...rithm_templates/SwinUNETR/scripts/algo.py → ...rithm_templates/swinunetr/scripts/algo.py b/...rithm_templates/SwinUNETR/scripts/algo.py → ...rithm_templates/swinunetr/scripts/algo.py
diff --git a/...ithm_templates/SwinUNETR/scripts/infer.py → ...ithm_templates/swinunetr/scripts/infer.py b/...ithm_templates/SwinUNETR/scripts/infer.py → ...ithm_templates/swinunetr/scripts/infer.py
diff --git a/...ithm_templates/SwinUNETR/scripts/train.py → ...ithm_templates/swinunetr/scripts/train.py b/...ithm_templates/SwinUNETR/scripts/train.py → ...ithm_templates/swinunetr/scripts/train.py
diff --git a/...m_templates/SwinUNETR/scripts/validate.py → ...m_templates/swinunetr/scripts/validate.py b/...m_templates/SwinUNETR/scripts/validate.py → ...m_templates/swinunetr/scripts/validate.py