Releases 0.4.0
Improvement: Improved ambiguous gene resolution.
Improvement: read lzma-compressed annotations in text and binary format.
Improvement: Support multiple bam/fofn (File-Of-FileNames) inputs.
Improvement: reduced false-positive fusions.
Improvement: Additional metadata for putative fusion candidates.
Improvement: Updated cached binary format. WARNING: this is a breaking change. Old binary annotation files will need to be re-generated.
Alteration: reduced chaining distance for clustering breakpoints.
Alteration: emit sense-antisense events by default.
Improvement: Maintain read ordering in reporting fusions.
Bug fix: Update reported breakpoints so that the interval described is the last-in-read and the second is first-soft-clipped.
Improvement: Add gene names to annotation in order they occur in reads.
Improvement: Report all breakpoint coordinates for reads in a breakpoint cluster, add as a new tag.
Improvement: Update read-through annotation such that we define it based on the breakpoint distance instead of the distance between genes.
You can’t perform that action at this time.
