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Fix dependencies and `dune utop` (#1292) #2398

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Run time

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Job	Run time
Make all	8m 8s
build (macos-latest, 4.14.2)	10m 20s
build (macos-latest, 5.3.0)	9m 18s
build (ubuntu-latest, 4.08.1)	7m 2s
build (ubuntu-latest, 4.14.2)	7m 10s
build (ubuntu-latest, 5.3.0)	8m 1s
build (windows-latest, 4.14.2)	17m 24s
build (windows-latest, 5.3.0)	17m 52s
	1h 25m 15s