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pynml-modchananalysis: investigate setting of minimum stepV

#454

· sanjayankur31 opened

on Jul 4, 2025

pynml-plotmorph -interactive (vispy) seems broken with numpy 2.3.1

#452

· sanjayankur31 opened

on Jun 25, 2025

Refactor mesh generation to decouple it from vispy code

#447

· sanjayankur31 opened

on Jun 3, 2025

[Bug] <code>sys.path</code> is not accessible when subprocess is called in <code>pynml.execute_command_in_dir_with_realtime_output</code>

#440

· adampdp opened

on Jan 29, 2025

Add utility function to enumerate all model parameters

good first issue

#433

· sanjayankur31 opened

on Oct 24, 2024

Add functionality to overlay data on to 3D visualisations

#426

· sanjayankur31 opened

on Sep 12, 2024

Tracking: multiple 3D vispy based visualisations do not work in a single jupyter notebook

#422

· sanjayankur31 opened

on Sep 5, 2024

Make getting model file list SBML aware

#372

· sanjayankur31 opened

on May 29, 2024

Implement exporting to Neuroglancer formats

#369

· sanjayankur31 opened

on May 22, 2024

[Bug] pynml-plotmorph: vispy: no mouse events

#358

· Sietse20 opened

on May 13, 2024

Add analysis of KineticState channels to <code>pynml-channelanalysis</code>

#357

· sanjayankur31 opened

on May 8, 2024

Extend <code>pynml</code> to include a <code>-biosimulations</code> flag to submit simulations

#347

· sanjayankur31 opened

on Apr 23, 2024