Skip to content

Commit

Permalink
up again
Browse files Browse the repository at this point in the history
Signed-off-by: Daena Rys <[email protected]>
  • Loading branch information
Daenarys8 committed Sep 27, 2024
1 parent 495638e commit b7ab074
Show file tree
Hide file tree
Showing 30 changed files with 809 additions and 763 deletions.
6 changes: 3 additions & 3 deletions docs/articles/addqmd.html

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

18 changes: 9 additions & 9 deletions docs/articles/data_analysis.html
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>

<meta charset="utf-8">
<meta name="generator" content="quarto-1.4.553">
<meta name="generator" content="quarto-1.4.555">

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

Expand Down Expand Up @@ -357,7 +357,7 @@ <h3 class="anchored" data-anchor-id="abundance">Abundance</h3>
<div class="cell-output-display">
<div>
<figure class="figure">
<p><img src="data_analysis_files/figure-html/unnamed-chunk-9-1.png" class="img-fluid figure-img" width="672"></p>
<p><img src="data_analysis_files/figure-html/plot-density1-1.png" class="img-fluid figure-img" width="672"></p>
</figure>
</div>
</div>
Expand All @@ -380,7 +380,7 @@ <h3 class="anchored" data-anchor-id="abundance">Abundance</h3>
<div class="cell-output-display">
<div>
<figure class="figure">
<p><img src="data_analysis_files/figure-html/unnamed-chunk-10-1.png" class="img-fluid figure-img" width="672"></p>
<p><img src="data_analysis_files/figure-html/plot-density2-1.png" class="img-fluid figure-img" width="672"></p>
</figure>
</div>
</div>
Expand Down Expand Up @@ -411,7 +411,7 @@ <h3 class="anchored" data-anchor-id="abundance">Abundance</h3>
<div class="cell-output-display">
<div>
<figure class="figure">
<p><img src="data_analysis_files/figure-html/unnamed-chunk-11-1.png" class="img-fluid figure-img" width="672"></p>
<p><img src="data_analysis_files/figure-html/plot-density3-1.png" class="img-fluid figure-img" width="672"></p>
</figure>
</div>
</div>
Expand Down Expand Up @@ -441,7 +441,7 @@ <h3 class="anchored" data-anchor-id="alpha-diversity">Alpha diversity</h3>
<div class="cell-output-display">
<div>
<figure class="figure">
<p><img src="data_analysis_files/figure-html/unnamed-chunk-12-1.png" class="img-fluid figure-img" width="672"></p>
<p><img src="data_analysis_files/figure-html/alpha-div-1.png" class="img-fluid figure-img" width="672"></p>
</figure>
</div>
</div>
Expand Down Expand Up @@ -478,7 +478,7 @@ <h3 class="anchored" data-anchor-id="unsupervised-ordinations">Unsupervised ordi
<div class="cell-output-display">
<div>
<figure class="figure">
<p><img src="data_analysis_files/figure-html/unnamed-chunk-14-1.png" class="img-fluid figure-img" width="672"></p>
<p><img src="data_analysis_files/figure-html/ordination-plot-1.png" class="img-fluid figure-img" width="672"></p>
</figure>
</div>
</div>
Expand Down Expand Up @@ -511,7 +511,7 @@ <h2 class="anchored" data-anchor-id="heatmaps">Heatmaps</h2>
<div class="cell-output-display">
<div>
<figure class="figure">
<p><img src="data_analysis_files/figure-html/unnamed-chunk-15-1.png" class="img-fluid figure-img" width="672"></p>
<p><img src="data_analysis_files/figure-html/heatmap-1.png" class="img-fluid figure-img" width="672"></p>
</figure>
</div>
</div>
Expand Down Expand Up @@ -577,7 +577,7 @@ <h2 class="anchored" data-anchor-id="antibiotic-susceptibility-ndaro">Antibiotic
<div class="cell-output-display">
<div>
<figure class="figure">
<p><img src="data_analysis_files/figure-html/unnamed-chunk-18-1.png" class="img-fluid figure-img" width="672"></p>
<p><img src="data_analysis_files/figure-html/ast-2-1.png" class="img-fluid figure-img" width="672"></p>
</figure>
</div>
</div>
Expand Down Expand Up @@ -618,7 +618,7 @@ <h2 class="anchored" data-anchor-id="antibiotic-susceptibility-ndaro">Antibiotic
<div class="cell-output-display">
<div>
<figure class="figure">
<p><img src="data_analysis_files/figure-html/unnamed-chunk-20-1.png" class="img-fluid figure-img" width="672"></p>
<p><img src="data_analysis_files/figure-html/ast-4-1.png" class="img-fluid figure-img" width="672"></p>
</figure>
</div>
</div>
Expand Down
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file not shown.
Loading

0 comments on commit b7ab074

Please sign in to comment.