Skip to content

Commit

Permalink
ReadMe Update
Browse files Browse the repository at this point in the history
  • Loading branch information
Ben Tully committed Nov 6, 2019
1 parent 557c910 commit 12a2405
Showing 1 changed file with 3 additions and 1 deletion.
4 changes: 3 additions & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -85,7 +85,7 @@ blastn \

## CRISPR Spacer Database Matched to Known Viruses

The CRISPR Spacer Database was used to search against two known virus databases that consisted of [NCBI Viral RefSeq representatives](https://www.ncbi.nlm.nih.gov/genome/viruses/) and [NCBI Validated Virus Resource from GenBank](https://www.ncbi.nlm.nih.gov/labs/virus/vssi/#/). The BLASTn search used the same parameters as described above.
The CRISPR Spacer Database was used to search against two known virus databases that consisted of [NCBI Viral RefSeq representatives](https://www.ncbi.nlm.nih.gov/genome/viruses/) and [NCBI Virus Variation Resource from GenBank](https://www.ncbi.nlm.nih.gov/labs/virus/vssi/#/). The BLASTn search used the same parameters as described above.

The CRISPR spacers matched X viruses in these representative databases. Cross-referenced to the known host-virus interaction database, X% matched virus-host and spacer-source.

Expand All @@ -98,4 +98,6 @@ Search through novel genomes to detect additional CRISPR spacer host links `minc

More to come.

# How to Relaunch From Progress Made in Virus Codeathon 2

### Zendo DOI

0 comments on commit 12a2405

Please sign in to comment.