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@MetabolicAtlas

Metabolic Atlas

Metabolic Atlas is a project at the National Bioinformatics Infrastructure Sweden, under the scientific direction of Prof. Jens Nielsen at Chalmers University.

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  1. MetabolicAtlas Public

    Open source genome-scale metabolic models of human and model animals

    Vue 21 3

  2. standard-GEM Public template

    The standard for open-source GEMs on GitHub

    19 5

  3. 3d-network-viewer Public

    The 3D component of the Map Viewer for MetabolicAtlas.org

    JavaScript 3 3

  4. data-generation Public

    Process the raw data-files for ingestion into the Neo4j database

    JavaScript

  5. data-files Public

    Source data files used when deploying Metabolic Atlas

    Jupyter Notebook

  6. standard-GEM-validation Public

    Validate standard-GEM repositories

    Python 3

Repositories

Showing 10 of 12 repositories
  • standard-GEM-validation Public

    Validate standard-GEM repositories

    Python 3 GPL-3.0 0 7 0 Updated Mar 11, 2025
  • MetabolicAtlas Public

    Open source genome-scale metabolic models of human and model animals

    Vue 21 GPL-3.0 3 112 11 Updated Jan 22, 2025
  • data-files Public

    Source data files used when deploying Metabolic Atlas

    Jupyter Notebook 0 0 2 0 Updated Oct 13, 2024
  • data-generation Public

    Process the raw data-files for ingestion into the Neo4j database

    JavaScript 0 MIT 0 2 0 Updated Oct 13, 2024
  • biohackathon23 Public
    JavaScript 2 CC-BY-4.0 0 3 0 Updated Nov 17, 2023
  • standard-GEM Public template

    The standard for open-source GEMs on GitHub

    19 CC-BY-4.0 5 13 0 Updated Oct 26, 2023
  • action-yamllint Public Forked from ibiqlik/action-yamllint

    GitHub Action - Yaml Lint

    Shell 0 MIT 43 0 0 Updated Oct 6, 2023
  • 3d-network-viewer Public

    The 3D component of the Map Viewer for MetabolicAtlas.org

    JavaScript 3 GPL-3.0 3 5 1 Updated Jul 19, 2023
  • memote-docker Public Forked from opencobra/memote-docker

    Use MEMOTE with Docker

    Dockerfile 0 Apache-2.0 2 0 0 Updated Mar 10, 2023
  • escher Public Forked from zakandrewking/escher

    Build, share, and embed visualizations of metabolic pathways.

    JavaScript 0 78 0 0 Updated Jan 25, 2023
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