v7.0.0

Breaking Changes

• The SaveRowsCommand has been updated to be a command wrapper for the query-saveRows.api
• The SaveRowsResponse now wraps the response from the new SaveRowsCommand
• Rename original SaveRowsResponse to RowsResponse
• Rename original SaveRowsCommand to BaseRowsCommand
• Rename original RowsResponse to BaseRowsResponse

Other changes

• Update Gradle, Gradle Plugins, HttpClient, and JSONObject versions

v6.3.0

• Update Commons Codec, Commons Logging, Gradle, Gradle Plugins, HttpClient, HttpCore, and JSONObject versions
• Remove defunct FileNotification API and uses
• Update publishing method for new Maven Central API

v6.2.0

• Add support for auditUserComment field for assay import
• Add support for allowPlateMetadata, plateMetadata fields for assay plate support
• Deprecate GetContainersResponse permissions methods which are incompatible with LabKey Server v24.8+
• Update Commons Codec, Commons Logging, Gradle, Gradle Plugins, HttpCore, and JSONObject versions

v6.1.0

• Issue 49238: Fix so all command responses correctly decode as UTF-8.
• Add MoveRowsCommand to query
  • Earliest compatible LabKey Server version: 24.1.0
• Remove deprecated GetDomainCommand; use GetDomainDetailsCommand instead.
• Remove deprecated method RowsResponse.getRequiredVersion().
• Deprecate GetUsersCommand methods getIncludeDeactivated() and setIncludeDeactivated(); use getIncludeInactive()
  and setIncludeInactive() instead.
• Remove Hamcrest references (unused)
• Update ApiKeyCredentialsProvider to respond to server auth challenges with the apikey header and use the session
  on subsequent requests.
• Update Commons Logging, Gradle, Gradle Plugins, HttpClient, and HttpCore versions

v6.0.0

• Encode SQL parameters passed by ExecuteSqlCommand and SqlExecuteCommand to avoid rejection by web application firewalls
  • Earliest compatible LabKey Server version: 23.9.0
  • These commands are no longer compatible with earlier versions of LabKey Server (23.8.x and before) by default, however,
    if targeting an older server, calling ExecuteSqlCommand.setWafEncoding(false) will restore the previous behavior.
• Update HttpCore, JSON-java, Gradle Plugins, and Gradle versions

v5.3.0

• Update to Gradle 8.3 and adjust away from deprecated syntax
• Add Ontology and Lineage filter type operators
• Add TotpManager, a simple helper that generates TOTP one-time passwords
• Update Commons Codec, HttpCore, and Gradle Plugins versions

v5.2.0

• Add RenameContainerCommand and RenameContainerResponse

v5.1.0

• Delegate first request behavior to the configured CredentialsProvider. Connection-based providers invoke login-ensureLogin.api and connection-less providers invoke login-whoAmI.api.
• Restore connection-based authentication for BasicCredentialsProvider
• Add logging to NetrcFileParser to help with debugging authentication problems
• Optional parameters to GetContainersCommand to reduce the size of the response payload
• Upgrade to most recent JSON-java, Gradle, and Gradle Plugins versions

v5.0.1

• Fix regression introduced in 5.0.0: RowsResponse.fixupParsedData() was called before _requiredVersion was set. This caused the fixup method to skip BigDecimal to Double conversions in the returned data maps.

v5.0.0

• Refactor the Command class hierarchy:
  • Add GetCommand, new abstract base class for all commands that use get
  • Make Command and PostCommand abstract
  • Add SimpleGetCommand, new concrete class used (instead of Command) to invoke GET API actions without creating a subclass
  • Add SimplePostCommand, new concrete class used (instead of PostCommand) to invoke POST API actions without creating a subclass
• Refactor parameter handling for consistency:
  • createParameterMap() is now used by subclasses to create and populate a mutable map of URL parameters
  • getParameters() now returns an immutable copy of the current URL parameter map for external use, typically logging or testing
  • Commands no longer stash and reuse the parameter map; createParameterMap() always creates a new map.
  • setParameters() is now available only on SimpleGetCommand and SimplePostCommand. Custom GetCommand and PostCommand
    subclasses that need to specify parameters are expected to override createParameterMap().
  • setJsonObject() is now available only on SimplePostCommand. Custom PostCommand subclasses that need to post JSON are
    expected to override getJsonObject().
• Stop passing command subclasses when constructing every CommandResponse. The two response classes that need this now implement
  it without burdening all other commands.
• Introduce HasRequiredVersion interface and use it when instantiating CommandResponse subclasses that need required version
• Remove all Command copy constructors. Same rationale as the earlier removal of copy methods.
• Switch SelectRowsCommand and NAbRunsCommand to post their parameters as JSON
• Fix NAbReplicate to handle "NaN" values
• Remove CommandException from getHttpRequest() throws list
• Adjust the Demo.java and Test.java tests to match current sample data and Command hierarchy changes