Dedicated for creation of julia docker image containing some libs 4 bioinformatics. It is generated using https://github.com/bcbi/SimpleContainerGenerator.jl (and file example_4_generation.jl).
To generate such repository:
- follow guidelines from https://github.com/bcbi/SimpleContainerGenerator.jl ;
- modify the generated install_packages.jl script. Currently it has a feature/bug that all non standard revisions are finally forgotten. A patch is to copy the line #2 to the end of the file.
- Modify docker file to add conda and mamba install.
- Unregistered conda packages cannot be smoothly wrapped up in a container. I would recommend use the source of such packages (if registration is not feasible) and to add them via LOAD_PATH variable.