Skip to content

v11: Add better exit control for gcm_run.j #775

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Draft
wants to merge 2 commits into
base: develop
Choose a base branch
from
Draft

v11: Add better exit control for gcm_run.j #775

Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
bae0ad6
v11: Add better exit control for gcm_run.j
mathomp4 Oct 27, 2025
aaa6eba
Capture status
mathomp4 Oct 27, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
14 changes: 12 additions & 2 deletions gcm_run.j
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -857,7 +857,7 @@ endif
#ln -sf $SSTDIR/dataoceanfile_MERRA2_SST.${OGCM_IM}x${OGCM_JM}.${yy}.data sst.data
#ln -sf $SSTDIR/dataoceanfile_MERRA2_ICE.${OGCM_IM}x${OGCM_JM}.${yy}.data fraci.data

@CICE6 #detect exisistence of certain fields in CICE6 restart
@CICE6 #detect existence of certain fields in CICE6 restart
@CICE6 ncdump -h INPUT/iced.nc | grep 'apnd' > /dev/null
@CICE6 if( $status == 0 ) then
@CICE6 echo 'pond state in restart, turn on restart flag if not already'
Expand Down Expand Up @@ -1092,12 +1092,22 @@ endif
@SINGULARITY_BUILD @OCEAN_PRELOAD $RUN_CMD $TOTAL_PES $SINGULARITY_RUN $GEOSEXE $IOSERVER_OPTIONS $IOSERVER_EXTRA --logging_config 'logging.yaml'
@NATIVE_BUILD @OCEAN_PRELOAD @SEVERAL_TRIES $RUN_CMD $TOTAL_PES $GEOSEXE $IOSERVER_OPTIONS $IOSERVER_EXTRA --logging_config 'logging.yaml'

# Capture the return code from GEOSgcm.x
# --------------------------------------
set run_status = $status

if ($run_status != 0) then
echo "GEOSgcm.x failed with return code $run_status"
exit $run_status
endif

if( $USE_SHMEM == 1 ) $GEOSBIN/RmShmKeys_sshmpi.csh >& /dev/null

if( -e EGRESS ) then
set rc = 0
else
set rc = -1
echo "EGRESS file not found, GEOSgcm.x likely failed"
exit 9
endif
echo GEOSgcm Run Status: $rc

Expand Down