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[115] Update Regulatory features links on Z-menu #1070

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[115] Update Regulatory features links on Z-menu #1070

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14 changes: 9 additions & 5 deletions modules/EnsEMBL/Web/ZMenu/Regulation.pm
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Original file line number Diff line number Diff line change
Expand Up @@ -40,21 +40,25 @@ sub content {
$self->caption($caption);

my $object = $self->new_object('Regulation', $reg_feature, $self->object->__data);

my $species = $hub->species;
my $species_defs = $hub->species_defs;
my $species_prod_name = $species_defs->get_config($species, 'SPECIES_PRODUCTION_NAME');
my $ensembl_version = $species_defs->ENSEMBL_VERSION;
my $feature_url = sprintf("https://regulation.ensembl.org/%s/regulatory_features/%s/%s", $ensembl_version, $species_prod_name, $object->stable_id);

$self->add_entry({
type => 'ID',
label => $object->stable_id,
link => $object->get_summary_page_url
label_html => sprintf("<a href=\"%s\" rel=\"external\" >%s</a>", $feature_url, $object->stable_id),
});

if (!($reg_feature->feature_type->name =~ /^EMAR/) && !($reg_feature->feature_type->name =~ /^CTCF/)) {
$self->add_entry({
type => 'Activity',
label => 'Regulatory activity',
link => $object->get_summary_page_url
label_html => sprintf("<a href=\"%s\" rel=\"external\" >Regulatory activity</a>", $feature_url),
});
}

$self->add_entry({
type => 'Type',
label => $object->feature_type->name
Expand Down