PEP-518 - Hatching

.github/workflows/build-and-test.yml

@@ -0,0 +1,40 @@
+# This workflow will install Python dependencies, run tests and lint with a single version of Python
+# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python
+
+name: Build and Test
+
+on:
+  push:
+    branches: [ "ESAEOEPCA-184" ]
+  pull_request:
+    branches: [ "main" ]
+
+permissions:
+  contents: read
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+
+    steps:
+    - uses: actions/checkout@v4
+    - name: Set up Python 3.10
+      uses: actions/setup-python@v4
+      with:
+        python-version: "3.10"
+        cache: "pip"
+    - name: Install dependencies
+      run: |
+        # python -m pip install --upgrade pip
+        pip install hatch
+    - name: Cache Hatch
+      id: cache-hatch
+      uses: actions/cache@v3
+      with:
+        path: /home/runner/.local/share/hatch/env/virtual/
+        key: ${{ runner.os }}-hatch
+    - name: Build
+      run: hatch build
+    #- name: Test
+    #  run: |
+    #    hatch -e test run nose2 --verbose

.github/workflows/package.yml

@@ -0,0 +1,47 @@
+name: Publish to Test PyPI
+
+on:
+  push:
+    branches: [ "ESAEOEPCA-184" ]
+  release:
+    types: [published]
+
+permissions:
+  contents: read
+
+jobs:
+  deploy:
+
+    runs-on: ubuntu-latest
+
+    environment: release
+    permissions:
+      id-token: write # IMPORTANT: this permission is mandatory for trusted publishing
+
+    steps:
+    - uses: actions/checkout@v4
+    - name: Set up Python
+      uses: actions/setup-python@v4
+      with:
+        python-version: '3.10'
+        cache: 'pip'
+    - name: Install dependencies
+      run: |
+        # python -m pip install --upgrade pip 
+        pip install hatch
+    - name: Build package
+      run: hatch build
+    # - name: Test package
+    #   run: hatch -e test run nose2 --verbose
+    - name: Publish package distributions to Test PyPI
+      if: github.ref != 'refs/heads/main'
+      uses: pypa/gh-action-pypi-publish@release/v1
+      with:
+        skip-existing: true
+        repository-url: https://test.pypi.org/legacy/
+    - name: Publish package distributions to PyPI
+      if: github.ref == 'refs/heads/main'
+      uses: pypa/gh-action-pypi-publish@release/v1
+      with:
+        skip-existing: true
+        repository-url: https://upload.pypi.org/legacy/

pyproject.toml

@@ -0,0 +1,127 @@
+[build-system]
+requires = ["hatchling"]
+build-backend = "hatchling.build"
+
+[project]
+name = "zoo_calrissian_runner"
+dynamic = ["version"]
+description = 'Python library for bridging zoo execution context and calrissian'
+readme = "README.md"
+requires-python = ">=3.8"
+license = {text = "Apache License (2.0)"}
+keywords = []
+authors = [
+  { name = "Fabrice Brito", email = "[email protected]" }
+]
+classifiers = [
+  "Development Status :: 4 - Beta",
+  "Programming Language :: Python",
+  "Programming Language :: Python :: 3.8",
+  "Programming Language :: Python :: 3.9",
+  "Programming Language :: Python :: 3.10",
+  "Programming Language :: Python :: 3.11",
+  "Programming Language :: Python :: 3.12",
+  "Programming Language :: Python :: Implementation :: CPython",
+  "Programming Language :: Python :: Implementation :: PyPy",
+]
+
+dependencies = [
+    "pycalrissian",
+    "cwl-wrapper",
+    "cwl-utils==0.14",
+    "attrs",
+    "loguru",
+    "setuptools",
+    "kubernetes",
+    "cwltool",
+    "zoo-framework"
+]
+
+[project.urls]
+Documentation = "https://github.com/EOEPCA/zoo-calrissian-runner#readme"
+Issues = "https://github.com/EOEPCA/zoo-calrissian-runner/issues"
+Source = "https://github.com/EOEPCA/zoo-calrissian-runner"
+
+[tool.hatch.version]
+path = "zoo_calrissian_runner/__about__.py"
+
+
+[tool.coverage.run]
+source_pkgs = ["zoo_calrissian_runner", "tests"]
+branch = true
+parallel = true
+omit = [
+  "zoo_calrissian_runner/__about__.py",
+]
+
+[tool.coverage.paths]
+zoo_calrissian_runner = ["zoo_calrissian_runner"]
+tests = ["tests"]
+
+[tool.coverage.report]
+exclude_lines = [
+  "no cov",
+  "if __name__ == .__main__.:",
+  "if TYPE_CHECKING:",
+]
+
+[tool.hatch.envs.default.env-vars]
+PIP_EXTRA_INDEX_URL = "https://test.pypi.org/simple/"
+
+[tool.hatch.envs.default]
+skip-install = false
+dependencies = [
+    "pycalrissian",
+    "cwl-wrapper",
+    "cwl-utils==0.14",
+    "attrs",
+    "loguru",
+    "setuptools",
+    "kubernetes",
+    "cwltool",
+    "zoo-framework"
+]
+
+
+[tool.hatch.envs.test]
+skip-install = false
+
+dependencies = [
+    "nose2",
+    "coverage",
+    "pycalrissian",
+    "cwl-wrapper",
+    "cwl-utils==0.14",
+    "attrs",
+    "loguru",
+    "setuptools",
+    "kubernetes",
+    "cwltool",
+    "zoo-framework",
+    "python-dotenv"
+]
+
+[tool.hatch.envs.test.env-vars]
+PIP_EXTRA_INDEX_URL = "https://test.pypi.org/simple/"
+RETRY_ATTEMPTS="0"
+
+[tool.hatch.envs.test.scripts]
+test = "hatch run nose2"
+testv = "hatch run nose2 --verbose"
+cov = ["coverage run --source=zoo_calrissian_runner -m nose2", "coverage report"]
+
+[[tool.hatch.envs.test.matrix]]
+python = ["3.8", "3.9", "3.10", "3.11", "3.12"]
+
+[tool.hatch.envs.docs]
+skip-install = false
+
+dependencies = [
+  "pdocs",
+  "mkdocs-material",
+  "mkdocs-jupyter"
+]
+
+[tool.hatch.envs.docs.scripts]
+serve = "mkdocs serve"
+deploy = "mkdocs gh-deploy --force"

zoo_calrissian_runner/__about__.py

@@ -0,0 +1 @@
+version = "0.2.1"