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When adding frame counts, missed model change and string to int conversion #501

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Merged
stephen-riggs merged 1 commit into from
Mar 7, 2025
Merged

When adding frame counts, missed model change and string to int conversion #501

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3 changes: 2 additions & 1 deletion src/murfey/client/contexts/tomo.py
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Original file line number Diff line number Diff line change
Expand Up @@ -638,7 +638,8 @@ def gather_metadata(
metadata_file.parent / data_file
)
mdoc_metadata["frame_count"] = int(
mdoc_metadata["eer_fractionation"] / mdoc_metadata["num_eer_frames"]
int(mdoc_metadata["eer_fractionation"])
/ int(mdoc_metadata["num_eer_frames"])
)
except Exception as e:
logger.error(f"Exception encountered in metadata gathering: {str(e)}")
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1 change: 1 addition & 0 deletions src/murfey/util/models.py
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Expand Up @@ -315,6 +315,7 @@ class ProcessFile(BaseModel): # Rename to TomoProcessFile
image_number: int
pixel_size: float
dose_per_frame: float
frame_count: int
mc_uuid: Optional[int] = None
voltage: float = 300
mc_binning: int = 1
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