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Anonymous AWS Access#5205

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adamnovak wants to merge 11 commits intomasterDataBiosphere/toil:masterfrom issues/5203-anonymous-awsDataBiosphere/toil:issues/5203-anonymous-awsCopy head branch name to clipboard

+1,067-615

Commits

Commits on Jan 30, 2025

• Add --awsAnonymousUrlAccess and TOIL_AWS_ANONYMOUS_URL_ACCESS

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  0ac77c7

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• Get halfway through refactoring URL support out from the job store class and into implementations and accessor widgets

  adamnovak

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  d024139

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Commits on Jan 31, 2025

• Split out URL utilities into their own file and use them

  adamnovak

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• Stop the Toil object from getting pickled inside CWL jobs that want filestore access

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  c4f44d5

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• Rework the pickling exceptions

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  150b60a

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• Use new field name

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  491514c

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• Adjust tests for new JobStore initialization dance

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  7f96c2b

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• Actually implement new API in job store implementations

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Commits on Feb 3, 2025

• Clear the other hooks in the cwltool RuntimeContext

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Commits on Feb 5, 2025

• Remove .config references on the Toil object and isolate options tests

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• Catch another config name

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