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@DamLabResources

DamLabResources

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  1. quantitative-reasoning-in-biology quantitative-reasoning-in-biology Public

    Jupyter Notebook

  2. cigarmath cigarmath Public

    A collection of python utilities for manipulating CIGARS.

    Python

  3. damlab-wrappers damlab-wrappers Public

    A collection of Snakemake wrappers and multiqc plugins targeted at Nanopore HIV sequence analysis.

    Python

  4. OMICS OMICS Public

    Repo for students of the Advanced OMICS Course

    Jupyter Notebook 13 18

  5. hiv-transformers hiv-transformers Public

    A collection of Hugging Face tools for analyzing HIV

    Jupyter Notebook 2

Repositories

Showing 10 of 43 repositories
  • quantitative-reasoning-in-biology Public
    DamLabResources/quantitative-reasoning-in-biology’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Mar 11, 2025
  • damlab-wrappers Public

    A collection of Snakemake wrappers and multiqc plugins targeted at Nanopore HIV sequence analysis.

    DamLabResources/damlab-wrappers’s past year of commit activity
    Python 0 0 0 0 Updated Mar 4, 2025
  • cigarmath Public

    A collection of python utilities for manipulating CIGARS.

    DamLabResources/cigarmath’s past year of commit activity
    Python 0 0 0 0 Updated Feb 25, 2025
  • VILOCA Public Forked from cbg-ethz/VILOCA

    VILOCA: VIral LOcal haplotype reconstruction and mutation CAlling for short and long read data

    DamLabResources/VILOCA’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Jan 13, 2025
  • ice Public Forked from synthego-open/ice

    Synthego ICE - Inference of CRISPR Editing software

    DamLabResources/ice’s past year of commit activity
    Python 0 33 0 0 Updated Jan 10, 2025
  • OMICS Public

    Repo for students of the Advanced OMICS Course

    DamLabResources/OMICS’s past year of commit activity
    Jupyter Notebook 13 AGPL-3.0 18 0 0 Updated Dec 19, 2024
  • pod5-file-format Public Forked from nanoporetech/pod5-file-format

    Pod5: a high performance file format for nanopore reads.

    DamLabResources/pod5-file-format’s past year of commit activity
    C++ 0 20 0 0 Updated Aug 29, 2024
  • Cas_HIV_hits Public

    Scripts and figures for Frontiers Manuscript.

    DamLabResources/Cas_HIV_hits’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 27, 2023
  • the-littlest-jupyterhub Public Forked from jupyterhub/the-littlest-jupyterhub

    Simple JupyterHub distribution for 1-100 users on a single server

    DamLabResources/the-littlest-jupyterhub’s past year of commit activity
    Python 1 BSD-3-Clause 369 0 0 Updated Sep 2, 2022
  • HIV-Quasipore-basecallers Public
    DamLabResources/HIV-Quasipore-basecallers’s past year of commit activity
    6 0 0 0 Updated Jun 5, 2022
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