Skip to content

RGT-0.12.1

Compare
Choose a tag to compare
@fabio-t fabio-t released this 22 Mar 18:51
· 256 commits to master since this release

RGT

  • Minor release change - possible compatibility break with previous versions
  • #107 MOODS no longer requires a manual installation step
  • Travis now runs unit tests on Mac OS too, to ensure support of the platform
  • Library versions and minor python 3 compatibility changes applied

Motif Analysis

  • #111 Many changes in the handling of custom motif repositories (documented here)
  • Added a filter parameter, to further subset the chosen motif databases
  • Increased unit test coverage
  • Some scripts, previously only internal, are now copied to the $RGTDATA/motifs folder

HINT

  • Added a function to check the presence of index files
  • HINT now will only use the mapped reads for footprinting and differential analysis