Develop#200

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ifiddes wants to merge 34 commits intomasterfrom

Commits on Jul 28, 2020

Standalone docker for issue #188
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Commits on Jul 29, 2020

Merge branch 'master' into standalone_docker
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Commits on Sep 11, 2020

try to remove pyfaidx
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oops
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oopsv2
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.
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ah i see
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make the index
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.
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str
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oops
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add develop, fix hierarchy
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duh
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samtools seems to hang
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ugh
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try this
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pyfaidx you have to iter over keys explicitly
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Allow for use of a local docker image.
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transcripts too
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Commits on Sep 14, 2020

Commits on Sep 15, 2020

ncbi script
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Commits on Sep 17, 2020

Commits on Sep 18, 2020

Commits on Sep 25, 2020

issue #205 and #204
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Commits on Oct 8, 2020

Commits on Oct 9, 2020