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Shell-ocp based on Open Catalyst Project

CircleCI codecov

Project description

  • The activity data generation step will update later...
  • The slab generation code task is under the Shell_repo/ocp/slab_generation/

Installation-step 1

See installation instructions.

Installation-step 2

  • Install specific versions of ipykernel, pymongo and mpi-client: pip install pymongo ipykernel mp-api
  • Install Catkit from Github: pip install git+https://github.com/ulissigroup/CatKit.git catkit
  • Clone this repo and cd ./Open-Catalyst-Dataset-OC22_dataset/ocdata/, install with: pip install -e ..

Acknowledgements

  • This work is an extension work based on OCP dataset, machine learning model and most of the scripts.

ocp is the Open Catalyst Project's library of state-of-the-art machine learning algorithms for catalysis.

It provides training and evaluation code for tasks and models that take arbitrary chemical structures as input to predict energies / forces / positions, and can be used as a base scaffold for research projects. For an overview of tasks, data, and metrics, please read our papers:

License

ocp is released under the MIT license.

Citing ocp

If you use this codebase in your work, please consider citing:

@article{ocp_dataset,
    author = {Chanussot*, Lowik and Das*, Abhishek and Goyal*, Siddharth and Lavril*, Thibaut and Shuaibi*, Muhammed and Riviere, Morgane and Tran, Kevin and Heras-Domingo, Javier and Ho, Caleb and Hu, Weihua and Palizhati, Aini and Sriram, Anuroop and Wood, Brandon and Yoon, Junwoong and Parikh, Devi and Zitnick, C. Lawrence and Ulissi, Zachary},
    title = {Open Catalyst 2020 (OC20) Dataset and Community Challenges},
    journal = {ACS Catalysis},
    year = {2021},
    doi = {10.1021/acscatal.0c04525},
}