Add Fury instance and mapdb serializer with tests

api/pom.xml

@@ -64,6 +64,10 @@
       <groupId>com.esotericsoftware</groupId>
       <artifactId>kryo</artifactId>
     </dependency>
+    <dependency>
+      <groupId>org.apache.fury</groupId>
+      <artifactId>fury-core</artifactId>
+    </dependency>
 
     <!-- citeproc CSL / BibTeX -->
     <dependency>

api/src/test/java/life/catalogue/common/kryo/map/MapDbObjectSerializerTest.java

@@ -53,17 +53,26 @@ public void serde() {
         .keySerializer(Serializer.LONG)
         .valueSerializer(new MapDbObjectSerializer(VerbatimRecord.class, pool, 128))
         .create();
-
+
+    final int repeat = 100;
     StopWatch watch = new StopWatch();
     verbatim.put(0l, gen(0));
     watch.start();
-    System.out.println(watch.getNanoTime());
-    for (long x=1; x<1000; x++) {
+    for (long x=1; x<repeat; x++) {
       verbatim.put(x, gen(x));
     }
-    watch.suspend();
-    System.out.println(watch.getNanoTime());
-
+    watch.stop();
+    System.out.println(watch);
+
+    watch.reset();
+    watch.start();
+    System.out.println("Reading...");
+    for (long x=1; x<repeat; x++) {
+      var obj = verbatim.get(x);
+    }
+    watch.stop();
+    System.out.println(watch);
+
     mapDb.close();
   }
 

pom.xml

@@ -62,6 +62,7 @@
     <dwca-io.version>2.16</dwca-io.version>
     <elasticsearch.version>8.1.3</elasticsearch.version>
     <fastutil.version>8.5.14</fastutil.version>
+    <fury.version>0.9.0</fury.version>
     <ganglia.version>1.0.7</ganglia.version>
     <gbif-api.version>1.16.12</gbif-api.version>
     <hikaricp.version>6.0.0</hikaricp.version>
@@ -541,6 +542,11 @@
         <version>${kryo-reflectasm.version}</version>
         <type>bundle</type>
       </dependency>
+      <dependency>
+        <groupId>org.apache.fury</groupId>
+        <artifactId>fury-core</artifactId>
+        <version>${fury.version}</version>
+      </dependency>
 
       <!-- docker -->
       <dependency>

webservice/pom.xml

@@ -188,6 +188,10 @@
       <groupId>com.esotericsoftware</groupId>
       <artifactId>kryo</artifactId>
     </dependency>
+    <dependency>
+      <groupId>org.apache.fury</groupId>
+      <artifactId>fury-core</artifactId>
+    </dependency>
 
     <!-- Elasticsearch / Lucene -->
     <dependency>

webservice/src/main/java/life/catalogue/importer/neo/NeoDb.java

@@ -66,7 +66,7 @@
  * Neo4j does not perform well storing large propLabel in its node and it is recommended to keep
  * large BLOBs or strings externally: https://neo4j.com/blog/dark-side-neo4j-worst-practices/
  * <p>
- * We use the Kryo library for a very performant binary
+ * We use the Fury library for a very performant binary
  * serialisation with the data keyed under the neo4j node value.
  */
 public class NeoDb {