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Spatial aligned svid lookup#120

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dlbrittain wants to merge 44 commits intomasterCAVEconnectome/MaterializationEngine:masterfrom spatial_aligned_svid_lookupCAVEconnectome/MaterializationEngine:spatial_aligned_svid_lookupCopy head branch name to clipboard

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Commits on Jul 28, 2024

• feat: add bounding box aligned lookup

  

  dlbrittain

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  fcollman

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  72c2a75

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• fix: close connection

  

  dlbrittain

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  d39588f

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• feat: add api endpoint to trigger workflow

  

  dlbrittain

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  02f7e9c

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• feat: add cv cache

  

  dlbrittain

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• feat: register workflow in celery worker

  

  dlbrittain

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  54a414f

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• chore: formatting

  

  dlbrittain

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  f8f09c7

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• fix: can use create seg table as task

  

  dlbrittain

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  1ba39b8

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• fix: don't convert uint64 to floats!

  

  dlbrittain

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  fcollman

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  7b584c4

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• fix: args does not have get

  

  dlbrittain

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  7943f59

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• fix: also filter if root ids = 0

  

  dlbrittain

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  e255a90

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• chore: bump requirements

  

  dlbrittain

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  fcollman

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  12db925

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• feat: use python3.10

  

  dlbrittain

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  fcollman

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  3b63a43

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• test: test against more python versions

  

  dlbrittain

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  fcollman

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  016bcc6

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• feat: improve supervoxel lookup

  

  dlbrittain

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  3bd9aa9

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• fix: wrap python versions in quotes (fixes 3.10)

  

  dlbrittain

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  000a340

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• fix(temp): try only python3.10

  

  dlbrittain

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  175f80d

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• adding cache reset to sv lookup

  fcollman

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  9eeaf16

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• bugfix: new create_segmentation_model and annotation_model

  fcollman

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  99a872d

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• fix: resolution normalization

  

  dlbrittain

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  2639770

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• fix: optionally turn off databaes upload for benchmarking

  

  dlbrittain

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  297d46e

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• fix: add upload to database endpoint

  

  dlbrittain

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  51938fc

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• fix: use arg parser

  

  dlbrittain

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  284ac80

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• fix: set timing to info level

  

  dlbrittain

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  21ce809

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• adding more timing information

  fcollman

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  a1bcfd1

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• try download point

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  cf4c998

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• adding caching

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  5e75557

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• adding corner debug statement

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  c626b3b

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• improved debugging

  fcollman

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  c0d8183

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• fix float call

  fcollman

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  27b121c

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• avoiding cloudvolume error

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  fdfc535

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• fix watershed

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  a74db5c

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• dropping saving chunk pos

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  b2b0cee

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• fix mip

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  5180e26

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• fixing meta call

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  a968c62

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• convert to string

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  5a71aff

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• trying more lru_bytes

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  00e5346

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• fixing log statement

  fcollman

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• upping to a gigabyte

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  d6a8101

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• adding lru configuration

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  30dfddf

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• changing envrionment variable name

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  645e03b

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• changing to environ variable to int

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  dbac6a4

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• fix voxel offset

  fcollman

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  107a359

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• fix: reindex to fix KeyError when index mismatched

  

  dlbrittain

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  fcollman

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  1fef6a9

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• test: add basic df tests

  

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