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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 356 152

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 24 14

Repositories

Showing 10 of 422 repositories
  • scrattch.patchseq Public
    AllenInstitute/scrattch.patchseq’s past year of commit activity
    R 0 1 0 1 Updated Apr 16, 2025
  • scrattch.taxonomy Public

    Allen Institute Taxonomy building R package

    AllenInstitute/scrattch.taxonomy’s past year of commit activity
    HTML 1 1 8 0 Updated Apr 16, 2025
  • scrattch.mapping Public

    Genearlized mapping scripts for RNA-seq and Patch-seq data

    AllenInstitute/scrattch.mapping’s past year of commit activity
    R 13 2 9 0 Updated Apr 16, 2025
  • aibs-informatics-cdk-lib Public

    Library for AWS CDK Constructs related to AIBS Informatics Services

    AllenInstitute/aibs-informatics-cdk-lib’s past year of commit activity
    Python 1 0 0 2 Updated Apr 16, 2025
  • biofile-finder Public

    An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

    AllenInstitute/biofile-finder’s past year of commit activity
    TypeScript 7 BSD-3-Clause 2 61 3 Updated Apr 16, 2025
  • MIES Public

    Multichannel Igor Electrophysiology Suite

    AllenInstitute/MIES’s past year of commit activity
    IGOR Pro 26 9 297 11 Updated Apr 16, 2025
  • cplAE_MET Public

    Coupled autoencoder extension for MET analysis.

    AllenInstitute/cplAE_MET’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Apr 16, 2025
  • deep-neurographs Public

    A Python package that corrects split mistakes in a fragmented neuron segmentation using a graph neural network.

    AllenInstitute/deep-neurographs’s past year of commit activity
    Python 4 MIT 0 0 0 Updated Apr 16, 2025
  • cell_type_mapper Public

    Repository for storing prototype functionality implementations for the BKP

    AllenInstitute/cell_type_mapper’s past year of commit activity
    Python 24 5 3 2 Updated Apr 15, 2025
  • vis Public

    Typescript packages for building big-data visualization tools & components, with examples for a variety of common data types & formats

    AllenInstitute/vis’s past year of commit activity
    TypeScript 5 BSD-3-Clause 0 0 5 Updated Apr 15, 2025
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