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pyproject.toml
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[build-system]
requires = ["setuptools>=60"]
build-backend = "setuptools.build_meta"
[project]
name = "datajoint"
# dynamically set in tools.setuptools.dynamic
dynamic = ["version"]
dependencies = [
"numpy",
"pymysql>=0.7.2",
"deepdiff",
"pyparsing",
"ipython",
"pandas",
"tqdm",
"networkx",
"pydot",
"minio>=7.0.0",
"matplotlib",
"otumat",
"faker",
"cryptography",
"urllib3",
"setuptools",
]
requires-python = ">=3.9,<4.0"
authors = [
{name = "Dimitri Yatsenko", email = "[email protected]"},
{name = "Raphael Guzman"},
{name = "Edgar Walker"},
{name = "DataJoint Contributors", email = "[email protected]"},
]
maintainers = [
{name = "Dimitri Yatsenko", email = "[email protected]"},
{name = "DataJoint Contributors", email = "[email protected]"},
]
# manually sync here: https://datajoint.com/docs/core/datajoint-python/latest/#welcome-to-datajoint-for-python
description = "DataJoint for Python is a framework for scientific workflow management based on relational principles. DataJoint is built on the foundation of the relational data model and prescribes a consistent method for organizing, populating, computing, and querying data."
readme = "README.md"
license = {file = "LICENSE.txt"}
keywords = [
"database",
"automated",
"automation",
"compute",
"data",
"pipeline",
"workflow",
"scientific",
"science",
"research",
"neuroscience",
"bioinformatics",
"bio-informatics",
"datajoint",
]
# https://pypi.org/classifiers/
classifiers = [
"Programming Language :: Python",
"Development Status :: 5 - Production/Stable",
"Intended Audience :: Science/Research",
"Intended Audience :: Healthcare Industry",
"License :: OSI Approved :: GNU Lesser General Public License v2 or later (LGPLv2+)",
"Topic :: Software Development :: Libraries :: Python Modules",
"Topic :: Scientific/Engineering",
"Topic :: Scientific/Engineering :: Bio-Informatics",
"Topic :: Scientific/Engineering :: Neuroscience", # Not standard, but just in case
]
[project.urls]
Homepage = "https://datajoint.com/docs"
Documentation = "https://datajoint.com/docs"
Repository = "https://github.com/datajoint/datajoint-python"
"Bug Tracker" = "https://github.com/datajoint/datajoint-python/issues"
"Release Notes" = "https://github.com/datajoint/datajoint-python/releases"
[project.entry-points."console_scripts"]
dj = "datajoint.cli:cli"
datajoint = "datajoint.cli:cli"
[project.optional-dependencies]
test = [
"pytest",
"pytest-cov",
]
dev = [
"pre-commit",
"black==24.2.0",
"flake8",
"isort",
"codespell",
# including test
"pytest",
"pytest-cov",
]
[tool.isort]
profile = "black"
[tool.setuptools]
packages = ["datajoint"]
[tool.setuptools.dynamic]
version = { attr = "datajoint.version.__version__"}