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feature_extraction.py
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337 lines (296 loc) · 15.8 KB
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from typing import List
import networkx as nx
import numpy as np
import tensorflow as tf
from graph_nets.graphs import GraphsTuple
from stable_baselines.a2c.utils import linear
from stable_baselines.common.tf_layers import ortho_init, _ln
from stable_baselines_ddr.graph_nets import DDRGraphNetwork
def vf_builder(vf_arch: str, latent: tf.Tensor,
act_fun: tf.function, shared_graph: GraphsTuple = None,
input_graph: GraphsTuple = None, layer_size: int = 64,
layer_count: int = 3,
iterations: int = 10) -> tf.Tensor:
"""
Builds the value function network for
Args:
vf_arch: arch to use as a string
latent: the observation input
act_fun: activation function
shared_graph: the gnn output from the policy
input_graph: GraphTuple before any processing
iterations: number of iterations of message passing
Returns:
A tensor which will hold the value
"""
if vf_arch == "shared":
output_globals_vf = tf.reshape(shared_graph.globals, [-1, layer_size])
latent_vf = output_globals_vf
latent_vf = act_fun(
linear(latent_vf, "vf_fc0", 128, init_scale=np.sqrt(2)))
latent_vf = act_fun(
linear(latent_vf, "vf_fc1", 128, init_scale=np.sqrt(2)))
elif vf_arch == "graph":
model_vf = DDRGraphNetwork(layer_size=layer_size)
output_graph_vf = model_vf(input_graph, iterations)
output_globals_vf = tf.reshape(output_graph_vf.globals,
[-1, layer_size])
latent_vf = output_globals_vf
elif vf_arch == "mlp":
latent_vf = latent
latent_vf = act_fun(
linear(latent_vf, "vf_fc0", 128, init_scale=np.sqrt(2)))
latent_vf = act_fun(
linear(latent_vf, "vf_fc1", 128, init_scale=np.sqrt(2)))
latent_vf = act_fun(
linear(latent_vf, "vf_fc2", 128, init_scale=np.sqrt(2)))
else:
raise Exception("No such vf network")
return latent_vf
def gnn_extractor(flat_observations: tf.Tensor, act_fun: tf.function,
network_graphs: List[nx.DiGraph], dm_memory_length: int,
iterations: int = 10, layer_size: int = 128,
layer_count: int = 3,
vf_arch: str = "mlp"):
"""
Constructs a graph network from the graph passed in. Then inputs are
traffic demands, placed on nodes as feature vectors. The output policy
tensor is built from the edge outputs (in line with the softmin routing
approach). The value function can be switched between mlp and graph net
using the net_arch argument.
:return: (tf.Tensor, tf.Tensor) latent_policy, latent_value of the
specified network. If all layers are shared, then ``latent_policy ==
latent_value``
"""
# get graph info
sorted_edges_list = [sorted(network_graph.edges()) for network_graph in
network_graphs]
num_edges_list = [len(l) for l in sorted_edges_list]
num_nodes_list = [network_graph.number_of_nodes() for network_graph in
network_graphs]
max_edges_len = max(num_edges_list)
sorted_edges_list = [edges + [(0, 0)] * (max_edges_len - len(edges)) for
edges in sorted_edges_list]
sorted_edges = tf.constant(sorted_edges_list)
num_edges = tf.constant(num_edges_list)
num_nodes = tf.constant(num_nodes_list)
# start manipulating input data
latent = flat_observations
num_batches = tf.shape(latent)[0]
# prepare helper data for graphs per entry in batch
graph_idxs = tf.cast(latent[:, 0], np.int32)
num_nodes_per_batch = tf.map_fn(lambda i: num_nodes[i], graph_idxs)
num_edges_per_batch = tf.map_fn(lambda i: num_edges[i], graph_idxs)
observation_sizes = tf.multiply(num_nodes_per_batch, dm_memory_length * 2)
full_observations = latent[:, 1:]
trimmed_observations = tf.RaggedTensor.from_tensor(full_observations,
lengths=observation_sizes)
# reshape data into correct sizes for gnn input
node_features = tf.reshape(trimmed_observations.flat_values,
[-1, 2 * dm_memory_length],
name="node_feat_input")
node_features = tf.pad(node_features,
[[0, 0], [0, layer_size - (2 * dm_memory_length)]])
# initialise unused input features to all zeros
edge_features = tf.zeros((tf.reduce_sum(num_edges_per_batch), layer_size),
np.float32)
global_features = tf.zeros((num_batches, layer_size), np.float32)
# repeat edge information across batches and flattened for graph_nets
sender_nodes = tf.map_fn(lambda i: sorted_edges[i][:, 0], graph_idxs)
sender_nodes = tf.RaggedTensor.from_tensor(sender_nodes,
lengths=num_edges_per_batch)
sender_nodes = sender_nodes.flat_values
receiver_nodes = tf.map_fn(lambda i: sorted_edges[i][:, 1], graph_idxs)
receiver_nodes = tf.RaggedTensor.from_tensor(receiver_nodes,
lengths=num_edges_per_batch)
receiver_nodes = receiver_nodes.flat_values
# repeat graph information across batches and flattened for graph_nets
n_node_list = num_nodes_per_batch
n_edge_list = num_edges_per_batch
input_graph = GraphsTuple(nodes=node_features,
edges=edge_features,
globals=global_features,
senders=sender_nodes,
receivers=receiver_nodes,
n_node=n_node_list,
n_edge=n_edge_list)
model = DDRGraphNetwork(layer_size=layer_size, layer_count=layer_count)
output_graph = model(input_graph, iterations)
# NB: reshape needs num_edges as otherwise output tensor has too many
# unknown dims
# first split per graph
output_edges = tf.RaggedTensor.from_row_lengths(output_graph.edges,
num_edges_per_batch)
# make a normal tensor so we can slice out edge values
output_edges = output_edges.to_tensor()
# then extract from each split the values we want and squeeze away last axis
output_edges = tf.squeeze(output_edges[:, :, 0::layer_size], axis=2)
# finally pad to correct size for output
output_edges = tf.pad(output_edges, [[0, 0], [0, max_edges_len -
tf.shape(output_edges)[1]]])
# global output is softmin gamma
output_globals = tf.reshape(output_graph.globals, (-1, layer_size))
output_globals = output_globals[:, 0]
output_globals = tf.reshape(output_globals, (-1, 1))
latent_policy_gnn = tf.concat([output_edges, output_globals], axis=1)
# build value function network
latent_vf = vf_builder(vf_arch, flat_observations, act_fun,
output_graph, input_graph, layer_size, layer_count,
iterations)
return latent_policy_gnn, latent_vf
def gnn_iter_extractor(flat_observations: tf.Tensor, act_fun: tf.function,
network_graphs: List[nx.DiGraph], dm_memory_length: int,
iterations: int = 10, layer_size: int = 64,
layer_count: int = 3,
vf_arch: str = "mlp"):
"""
Constructs a graph network from the graph passed in. Then inputs are
traffic demands, placed on nodes as feature vectors. The inputs also
include flags as to whether and edge has been set and which one should be
set this iteration which are placed on the edges. The output policy
tensor is built from the edge outputs (in line with the softmin routing
approach). The value function can be switched between mlp and graph net
using the net_arch argument.
:return: (tf.Tensor, tf.Tensor) latent_policy, latent_value of the
specified network. If all layers are shared, then ``latent_policy ==
latent_value``
"""
# get graph info
sorted_edges_list = [sorted(network_graph.edges()) for network_graph in
network_graphs]
num_edges_list = [len(l) for l in sorted_edges_list]
num_nodes_list = [network_graph.number_of_nodes() for network_graph in
network_graphs]
max_edges_len = max(num_edges_list)
sorted_edges_list = [edges + [(0, 0)] * (max_edges_len - len(edges)) for
edges in sorted_edges_list]
sorted_edges = tf.constant(sorted_edges_list)
num_edges = tf.constant(num_edges_list)
num_nodes = tf.constant(num_nodes_list)
# start manipulating the input
latent = flat_observations
num_batches = tf.shape(latent)[0]
# prepare helper data for graphs per entry in batch
graph_idxs = tf.cast(latent[:, 0], np.int32)
num_nodes_per_batch = tf.map_fn(lambda i: num_nodes[i], graph_idxs)
num_edges_per_batch = tf.map_fn(lambda i: num_edges[i], graph_idxs)
observation_sizes = tf.multiply(num_nodes_per_batch,
dm_memory_length * 2) + tf.multiply(
num_edges_per_batch, 2)
full_observations = latent[:, 1:]
trimmed_observations = tf.RaggedTensor.from_tensor(full_observations,
lengths=observation_sizes)
# slice apart the node and edge features in each seciton of batch
node_observation_sizes = tf.multiply(num_nodes_per_batch,
dm_memory_length * 2)
edge_observation_sizes = tf.multiply(num_edges_per_batch, 2)
interleaved_lengths = tf.reshape(
tf.stack([node_observation_sizes, edge_observation_sizes], axis=1),
[-1])
flattened_observations = trimmed_observations.flat_values
interleaved_observations = tf.RaggedTensor.from_row_lengths(
flattened_observations, interleaved_lengths)
node_features_slice = interleaved_observations[::2].flat_values
edge_features_slice = interleaved_observations[1::2].flat_values
# reshape and pad for input to gnn
node_features = tf.reshape(node_features_slice, [-1, 2 * dm_memory_length])
node_features = tf.pad(node_features,
[[0, 0], [0, layer_size - (2 * dm_memory_length)]])
edge_features = tf.reshape(edge_features_slice, [-1, 2])
edge_features = tf.pad(edge_features, [[0, 0], [0, layer_size - 2]])
# initialise global input features to zeros (as are unused)
global_features = tf.zeros((num_batches, layer_size), np.float32)
# repeat edge information across batches and flattened for graph_nets
sender_nodes = tf.map_fn(lambda i: sorted_edges[i][:, 0], graph_idxs)
sender_nodes = tf.RaggedTensor.from_tensor(sender_nodes,
lengths=num_edges_per_batch)
sender_nodes = sender_nodes.flat_values
receiver_nodes = tf.map_fn(lambda i: sorted_edges[i][:, 1], graph_idxs)
receiver_nodes = tf.RaggedTensor.from_tensor(receiver_nodes,
lengths=num_edges_per_batch)
receiver_nodes = receiver_nodes.flat_values
# repeat graph information across batches and flattened for graph_nets
n_node_list = num_nodes_per_batch
n_edge_list = num_edges_per_batch
input_graph = GraphsTuple(nodes=node_features,
edges=edge_features,
globals=global_features,
senders=sender_nodes,
receivers=receiver_nodes,
n_node=n_node_list,
n_edge=n_edge_list)
# Our only output is a single global which is the value to set the edge
# We still output other for use in shared part of value function
# The global output is: [edge_value, gamma_value]
model = DDRGraphNetwork(layer_size=layer_size, layer_count=layer_count)
output_graph = model(input_graph, iterations)
output_globals = tf.reshape(output_graph.globals,
tf.constant([-1, layer_size], np.int32))
output_globals = output_globals[:, 0:2]
latent_policy_gnn = output_globals
# build value function network
latent_vf = vf_builder(vf_arch, flat_observations, act_fun,
output_graph, input_graph, layer_size, layer_count,
iterations)
return latent_policy_gnn, latent_vf
def custom_lstm(input_tensor, mask_tensor, cell_state_hidden, scope, n_hidden,
init_scale=1.0, layer_norm=False):
"""
Creates an Long Short Term Memory (LSTM) cell for TensorFlow to be used for DDR
:param input_tensor: (TensorFlow Tensor) The input tensor for the LSTM cell
:param mask_tensor: (TensorFlow Tensor) The mask tensor for the LSTM cell
:param cell_state_hidden: (TensorFlow Tensor) The state tensor for the LSTM cell
:param scope: (str) The TensorFlow variable scope
:param n_hidden: (int) The number of hidden neurons
:param init_scale: (int) The initialization scale
:param layer_norm: (bool) Whether to apply Layer Normalization or not
:return: (TensorFlow Tensor) LSTM cell
"""
_, n_input = [v.value for v in input_tensor[0].get_shape()]
with tf.variable_scope(scope):
weight_x = tf.get_variable("wx", [n_input, n_hidden * 4],
initializer=ortho_init(init_scale))
weight_h = tf.get_variable("wh", [n_hidden, n_hidden * 4],
initializer=ortho_init(init_scale))
bias = tf.get_variable("b", [n_hidden * 4],
initializer=tf.constant_initializer(0.0))
if layer_norm:
# Gain and bias of layer norm
gain_x = tf.get_variable("gx", [n_hidden * 4],
initializer=tf.constant_initializer(1.0))
bias_x = tf.get_variable("bx", [n_hidden * 4],
initializer=tf.constant_initializer(0.0))
gain_h = tf.get_variable("gh", [n_hidden * 4],
initializer=tf.constant_initializer(1.0))
bias_h = tf.get_variable("bh", [n_hidden * 4],
initializer=tf.constant_initializer(0.0))
gain_c = tf.get_variable("gc", [n_hidden],
initializer=tf.constant_initializer(1.0))
bias_c = tf.get_variable("bc", [n_hidden],
initializer=tf.constant_initializer(0.0))
cell_state, hidden = tf.split(axis=1, num_or_size_splits=2,
value=cell_state_hidden)
for idx, (_input, mask) in enumerate(zip(input_tensor, mask_tensor)):
cell_state = cell_state * (1 - mask)
hidden = hidden * (1 - mask)
if layer_norm:
gates = _ln(tf.matmul(_input, weight_x), gain_x, bias_x) \
+ _ln(tf.matmul(hidden, weight_h), gain_h, bias_h) + bias
else:
gates = tf.matmul(_input, weight_x) + tf.matmul(hidden,
weight_h) + bias
in_gate, forget_gate, out_gate, cell_candidate = tf.split(axis=1,
num_or_size_splits=4,
value=gates)
in_gate = tf.nn.sigmoid(in_gate)
forget_gate = tf.nn.sigmoid(forget_gate)
out_gate = tf.nn.sigmoid(out_gate)
cell_candidate = tf.tanh(cell_candidate)
cell_state = forget_gate * cell_state + in_gate * cell_candidate
if layer_norm:
hidden = out_gate * tf.tanh(_ln(cell_state, gain_c, bias_c))
else:
hidden = out_gate * tf.tanh(cell_state)
input_tensor[idx] = hidden
cell_state_hidden = tf.concat(axis=1, values=[cell_state, hidden])
return input_tensor, cell_state_hidden