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Clean raw data prior to assembly #36

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gargkritika opened this issue Jul 13, 2022 · 0 comments
Open

Clean raw data prior to assembly #36

gargkritika opened this issue Jul 13, 2022 · 0 comments

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@gargkritika
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Hi

I am planning to use Haslr for my project. I have ~100X illumina short read data and ~15X long read data from oxford nanopore. I was wondering does Haslr perform any cleanup prior to assembly or we should first clean the raw data and then use Haslr for genome assembly.

Thank you
Best regards
Kritika
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@gargkritika