Merge pull request #51 from stevenweaver/master

adding requires.txt file

Author: stevenweaver

requires.txt

@@ -0,0 +1,3 @@
+numpy
+biopython
+cython

setup.py

@@ -25,7 +25,7 @@ def setup_package():
 
     setup(
         name='hivtrace',
-        version='0.4.4',
+        version='0.4.5',
         description='HIV-TRACE',
         author='Joel Wertheim, Sergei Pond, and Steven Weaver',
         author_email='[email protected]',
@@ -45,10 +45,10 @@ def setup_package():
             },
         install_requires=[
             'biopython >= 1.58',
-            'biopython-extensions >= 0.18.3',
+            'bioext >= 0.19.4',
             'hppy >= 0.9.9',
             'tornado >= 4.3',
-            'hivclustering == 1.2.8',
+            'hivclustering == 1.3.2',
             ],
         entry_points={
             'console_scripts': [