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craigrbarnescraigrbarnes
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closer match to HEAL style
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‎README.md

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This is the base REPOSITORY for Gen3.2 data commons.
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This is the NextJS application for the HEAL Data Commons.
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## Getting Started
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Gen3 Data Commons using the Gen3 Frontend Framework is a matter of the following:
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The HEAL Data Commons develop quick startup:
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* create a clone of [Gen3 Data Commons Application](https://github.com/uc-cdis/commons-frontend-app/)  
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* create a clone of [HEAL Data Commons](https://github.com/uc-cdis/heal-data-commons)
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* Configure the commons by editing the configuration files in the ```config```
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Changes to the Gen3 Data Commons Application can be pulled from the Common Frontend Repository. You need configure git to pull from the Common Frontend Repository.
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```bash
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git remote add upstream https://github.com/uc-cdis/commons-frontend-app.git
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git remote add upstream https://github.com/uc-cdis/heal-data-commons.git
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```
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or
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```bash
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git remote add upstream [email protected]:uc-cdis/commons-frontend-app.git
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git remote add upstream [email protected]:uc-cdis/heal-data-commons.git
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```
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changes to ```main``` can be pulled from the Common Frontend Repository by running:
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## Installation
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The minimum node version is set to v20.11.0 only from an LTS perspective.
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The minimum node version is set to v20.71.0.
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Node can be downloaded from the official Node.js site. You may also consider using a [Node version manager](https://docs.npmjs.com/cli/v7/configuring-npm/install#using-a-node-version-manager-to-install-nodejs-and-npm).
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Your version of Node may not ship with npm v10. To install it, run:
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```bash
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npm install npm@10.2.4 -g
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npm install npm@10.8.2 -g
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```
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Note: if you see this error:
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Alternatively, you can use `nvm` to install the correct version of npm:
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```bash
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nvm install 20.11.0
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nvm install 20.17.0
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```
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### Install Dependencies
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```bash
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docker build .
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```
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## Configuration
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All of the configuration files are located in ```config```. As HEAL is current only used for the landing page the
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configuration that are used are:
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* navigation.json
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* footer.json

‎config/heal/alternate_colors/dark.json

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‎config/heal/alternate_colors/pallet2.json

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‎config/heal/alternate_colors/urban.json

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‎config/heal/banner.json

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[
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{
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"message": "[View the latest studies that have shared data with the HEAL Data Platform!](/landing/newly-available-datasets)",
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"level": "MESSAGE",
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"dismissible": true,
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"isExternalLink": false,
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"id": 0
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},
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{
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"message": "Our helpdesk has moved! Starting 8/21, please contact us at [[email protected]](mailto:[email protected])",
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"level": "MESSAGE",
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"dismissible": false,
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"isExternalLink": false,
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"id": 0
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}
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]

‎config/heal/footer.json

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{
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"footerRightLogos": [
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[
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"classNames": {
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"mode": "replace",
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"root": "bg-navigation-footer px-8 py-4"
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},
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"rightSection": {
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"className": "flex justify-start items-start",
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"columns": [
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{
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"rows": [
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{
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"Section": {
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"className": "flex justify-start items-start",
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"columns": [
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{
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"classNames": {
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"root": "pl-8",
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"heading": "font-bold text-xl text-white font-heading",
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"rowItem": "heal-link-footer flex flex-col font-medium text-sm p-0.5 text-white font-content"
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},
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"heading": "Contact",
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"rows": [
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{
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"Link": {
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"text": "About Us",
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"href": "/landing/about-us",
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"linkType": "gen3ff"
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}
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},
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{
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"Link": {
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"text": "Contact",
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"href": "/landing/contact",
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"linkType": "gen3ff"
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}
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}
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]
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},
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{
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"classNames": {
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"root": "pl-10",
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"heading": "font-bold text-xl text-white font-heading",
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"rowItem": "heal-link-footer flex flex-col font-medium text-sm p-0.5 text-white font-content"
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},
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"heading": "Help",
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"rows": [
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{
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"Link": {
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"text": "User Guides",
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"href": "/documentation"
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}
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},
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{
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"Link": {
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"text": "Tutorials",
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"href": "/documentation/platform_tutorial_videos"
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}
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},
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{
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"Link": {
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"text": "FAQ",
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"href": "/documentation/faqs"
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}
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}
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]
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},
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{
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"classNames": {
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"root": "pl-10",
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"heading": "font-bold text-xl text-white font-heading",
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"rowItem": "heal-link-footer flex flex-col font-medium text-sm p-0.5 text-white font-content"
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},
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"heading": "Platform",
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"rows": [
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{
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"Link": {
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"text": "Workspaces",
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"href": "/workspace",
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"linkType": "portal"
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}
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},
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{
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"Link": {
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"text": "Discovery",
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"href": "/discovery",
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"linkType": "portal"
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}
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},
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{
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"Link": {
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"text": "Profile",
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"href": "/identity",
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"linkType": "portal"
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}
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}
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]
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}
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]
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}
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},
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{
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"Links": {
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"className": "pt-1 m-1 text-right text-xs text-white font-content",
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"links": [
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{
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"text": "NIH HEAL Initiative",
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"href": "https://heal.nih.gov/"
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},
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{
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"text": "HHS Responsible Disclosure Form",
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"href": "https://hhs.responsibledisclosure.com/hc/en-us"
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}
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]
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}
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}
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]
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}
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]
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},
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"leftSection": {
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"className": "flex items-start",
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"columns": [
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{
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"logo": "/images/gen3.png",
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"width": 132,
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"height": 60,
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"description": "Gen3 Logo"
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"classNames": {
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"mode": "replace",
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"root": "flex flex-col mr-8 justify-between"
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},
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"rows": [
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{
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"Icon": {
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"className": "mb-4",
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"logo": "/images/gen3.png",
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"width": 80,
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"height": 40,
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"description": "Gen3 Logo"
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}
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},
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{
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"Icon": {
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"logo": "/images/createdby.png",
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"width": 120,
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"height": 38,
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"description": "created by CTDS at the University of Chicago"
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}
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}
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]
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},
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{
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"logo": "/images/createdby.png",
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"width": 170,
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"height": 60,
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"description": "Created by CTDS"
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"classNames": {
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"root": "flex flex-col justify-center mr-8"
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},
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"rows": [
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{
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"Icon": {
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"logo": "/images/logo.png",
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"width": 164,
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"height": 100,
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"description": "NIH HEAL Logo"
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}
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}
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]
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},
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{
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"classNames": {
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"mode": "replace",
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"root": "w-1/5 text-xs text-white text-left font-content"
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},
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"rows": [
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{
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"Label": {
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"className": "p-1",
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"text": "The HEAL Data Platform is funded by the NIH HEAL Initiative."
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}
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},
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{
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"Label": {
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"className": "p-1",
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"text": "NIH HEAL Initiative and Helping to End Addiction Long-term are service marks of the U.S. Department of Health and Human Services."
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}
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}
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]
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}
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]
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]
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}
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}

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