5.27.0

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.26.1

Notes to tag/commit: 5.27.0

Generated: 2024-06-10

Improvements

• Updates deprecated "classic" endpoint for ClinicalTrials.gov and replaces
  it with new ClinicalTrials.gov API v2.0 (#1540)
• Adds debouncing for search input on VADC Atlas Data Dictionary application
  to improve UX when typing searches with large table data sizes (#1548)
• Updates column names and formats numbers with commas to improve readability
  (#1548)
• Update attrition table component to dynamically generate breakdown columns
  instead of relying on hardcoded value (#1548)
• Globally renames react state data to displayedData to improve
  code clarity. (#1548)

Deployment Changes

• Need to update to CEDAR wrapper 0.5.0
  https://github.com/uc-cdis/cedar-wrapper-service/releases/tag/0.5.0 for
  this feature (#1540)

New Features

• Adds a search bar message in VADC Data Dictionary that is revealed when the
  user searches for a result whose column is hidden on the current page due
  to their column management selection. This message includes a button that
  allows the user to reset their column management selections to display the
  hidden information. (#1548)

Bug Fixes

• Removes the delay that occurs when opening GWAS Results after switching
  teams, such as after Selecting team1, Open GWAS Results, wait 5s, Select
  team2, Open GWAS Results. Before you would see team1 results for first 5s
  or so (#1548)
• CheckSearchTermUtils updated to handle user searches including commas and
  percentages, fixes bug with zeros (before searching for zero did not work
  correctly nor highlight). Added new function formatForSearchComparison to
  support this. (#1548)
• Adds spinner until studies are available, preventing user from entering
  information before form is ready for it (#1540)

5.26.1

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.26.0

Notes to tag/commit: 5.26.1

Generated: 2024-06-04

Bug Fixes

• Discovery: fixed a bug that button incorrectly disabled because of
  duplicated required IDP tags (#1545)

Improvements

• Discovery: use file manifest instead of study IDs for direct download
  (#1545)

5.26.0

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.25.0

Notes to tag/commit: 5.26.0

Generated: 2024-06-03

Bug Fixes

• Discovery: fix another bug cause the page to crash due to incorrectly
  handling optional tags field (#1544)
• Discovery: fixed a bug causing the page to crash due to inappropriately
  handling optional tags field (#1543)

New Features

• Updates VADC Atlas Data Dictionary app so that columns are sorted based on
  their data type, making it easier for users to find the desired row data.
  (#1530)
• Updates Atlas Data Dictionary application to use API endpoint instead of
  test data (#1525)
• AtlasDataDictionaryContainer now wraps application in protected content
  component to ensure users are logged in before accessing application (#1525)
• Adds rules for Data Dictionary Name form field to enforce valid file names
  (#1524)
• Improves form usability by updating registration form with new messages
  including an email link (#1515)

Improvements

• Remove the nginx routing regex pattern specific to file extensions, so it
  won't match for project IDs that contain a "." (#1538)
• Updates VADC Atlas Data Dictionary numeric charts to use ticks with an
  interval of 1 (every other tick is shown) and to use rounded and slanted
  ticks. Formats data displayed in tool tips. (#1530)
• Adds spacing to Concept ID columns to improve readability (#1525)

Dependency Updates

• Bumps ejs from 3.1.9 to 3.1.10. (#1528)
• Bumps
  follow-redirects
  from 1.15.5 to 1.15.6. (#1522)
• Bumps express from 4.18.2 to
  4.19.2. (#1510)
• Bumps @adobe/css-tools from 4.2.0 to
  4.3.2. (#1461)
• Bumps
  follow-redirects
  from 1.15.2 to 1.15.5. (#1482)

5.25.0

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.24.0

Notes to tag/commit: 5.25.0

Generated: 2024-04-15

New Features

• Add username column to results table (#1519)
• Adds column management to VADC Atlas Data Dictionary (#1518)
• Retrieve covariates by concept type (#1518)

Improvements

• Styles the global banner on data portal (#1518)
• Globally updates all instances of the variable nr_persons to personCount to
  improve code maintainability, clarity and communication (#1518)
• more consistent naming between quantitative and case-control gwas modules
  (#1518)
• Adds unit test to ensure study level metadata button does not render when
  the resourceInfo does not include (#1516)
• the study metadata field name reference from the discovery config (#1516)
• Adds file name sanitation for zipped JSON files as part of VLMD download.
  (#1512)
• Adds space in error message for failed VLMD downloads. (#1512)

Bug Fixes

• Updates the logic for the study level metadata button so it is not disabled
  even when there is noData (#1516)

va_202404

What's Changed

• HP-1413 Feat/sanitize vlmd zipped file names by @jarvisraymond-uchicago in #1512
• Fix/slmd button not clickable by @jarvisraymond-uchicago in #1516
• VADC-1011 VADC-1049 VADC-940 Feat/vadc sprint06 by @jarvisraymond-uchicago in #1518
• Add username column to GWAS result app

Full Changelog: 5.24.0...va_202404

Add guppy defaultFilter functionality

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.23.0

Notes to tag/commit: 5.24.0

Generated: 2024-03-27

New Features

• add guppy defaultFilter functionality (#1508)

5.23.0

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.22.2

Notes to tag/commit: 5.23.0

Generated: 2024-03-26

New Features

• Discovery: added an optional config field to allow displaying a subheader
  under header (#1507)
• Updates Atlas Data Dictionary to use an integrated approach to handling UI
  events, allowing different UI table updates to update each other. This
  improves UX by enabling pagination resets and avoids problems such as being
  on page 3 when there is no longer enough data to populate 3 pages. (#1509)
• Updates the Download Study Level Metadata button to not render a popover
  (#1505)
• Add openICPSR as an option for repo selection (#1503)
• Adds charts to VADC Data Dictionary (#1497)
• Adds button to OHDSI Atlas app to open VADC Data Dictionary App in a new
  tab (#1497)
• Updates value for cohort in Job Details from the cohort ID to the cohort
  name (#1497)
• Ensures data source used by CohortMiddlewareApi getSources function is
  delivered in expected format or throws error. (#1497)

Bug Fixes

• Fixes issue with entries header showing incorrect values (#1509)
• Fixes stylelint issues in AtlasDataDictionary.css (#1509)
• Fixes issue with incorrect number of entries shown on the second page when
  there are more entries than one page can hold but less than three pages
  (#1509)
• Introduced an onClear prop that clears tags in data-portal when you hit the
  "X" clear button. Previously, pressing the button would result in no
  action. (#1504)

Improvements

• Populate both the Gen3 tag and the data_repositories when only a repository
  name is indicated during study registration (#1501)
• Refactored Actions Buttons Test to increase coverage and concision (#1505)
• Discovery: for AggWTS feature, deal with the fact that some commons_url
  from config has portocol prefixes instead of a clean hostname (#1499)
• Refactors Discovery Details page to use modularized components (#1500)
• Updates unit test for Discovery page to pass following this update (#1500)

Dependency Updates

• Bumps ip from 2.0.0 to 2.0.1. (#1489)

5.22.2

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.22.1

Notes to tag/commit: 5.22.2

Generated: 2024-03-11

Bug Fixes

• Discovery: make sure arrays that passed into list components are always
  single-level (#1496)

Improvements

• Updated list of repos showing in HEAL Study registration form to include
  SPARC (#1495)

5.22.1

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.22.0

Notes to tag/commit: 5.22.1

Generated: 2024-03-07

Bug Fixes

• Discovery: fixed an issue that array values are incorrectly flattened for
  list components (#1494)

5.22.0

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.21.0

Notes to tag/commit: 5.22.0

Generated: 2024-02-29

New Features

• Add buttons for downloading individual file in manifest from the tabbed
  version discovery details page (#1492)
• Adds download variable metadata button to action buttons within data
  download list (#1476)

Improvements

• Add IDP login tooltip for discovery detail page action buttons (#1492)
• Makes the DownloadAllModal a more reusable and generic DownloadModal
  within data download list component (#1476)
• Adds additional type checking to CheckHealLoginNeeded to avoid JS errors
  now that function is being called in more places. (#1476)