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‎Module 4/app.js

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@@ -36,7 +36,7 @@ var a1_data = {
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lineTension: 0.5,
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fill: false,
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borderColor: 'red',
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borderWidth: 1.5
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borderWidth: 0.8
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}
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var a2_data = {
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label: "A2",

‎Module 5/app.js

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const N_CLONES = 100
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const a1_prob = 0.5
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const a2_prob = 1 - a1_prob
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const N_GEN = 10
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const gridx = Math.round(Math.sqrt(N_CLONES)) * Math.round(Math.sqrt(N_CLONES))==N_CLONES?Math.round(Math.sqrt(N_CLONES)) : Math.round(Math.sqrt(N_CLONES))+1
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const gridy = Math.round(Math.sqrt(N_CLONES)) * Math.round(Math.sqrt(N_CLONES))==N_CLONES?Math.round(Math.sqrt(N_CLONES)) : Math.round(Math.sqrt(N_CLONES))+1
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var grid = [...Array(gridx*gridy).keys()]
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console.log(JSON.stringify(grid));
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// var ctx = document.getElementById('myChart').getContext('2d');
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// var a1_data = {
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// label: "A1",
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// data: arr_a1,
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// lineTension: 0.5,
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// fill: false,
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// borderColor: 'red',
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// borderWidth: 0.8
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// }
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// var a2_data = {
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// label: "A2",
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// data: arr_a2,
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// lineTension: 0.5,
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// fill: false,
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// borderColor: 'blue',
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// borderWidth: 1.5
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// }
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// const data = {
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// labels: [...Array(gen).keys()],
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// datasets: [a1_data, a2_data]
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// };
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// var myChart = new Chart(ctx, {
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// type: 'line',
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// data: data,
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// options: {
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// scales: {
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// y: {
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// beginAtZero: true
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// }
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// },
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// bezierCurve: true
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// }
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// });
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// myChart.update()
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// }

‎Module 5/main.html

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<!DOCTYPE html>
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<html lang="en">
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<head>
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<meta charset="UTF-8">
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<meta http-equiv="X-UA-Compatible" content="IE=edge">
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<meta name="viewport" content="width=device-width, initial-scale=1.0">
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<title>Document</title>
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<script src='https://cdnjs.cloudflare.com/ajax/libs/Chart.js/2.9.3/Chart.min.js'></script>
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<link href="https://cdn.jsdelivr.net/npm/[email protected]/dist/css/bootstrap.min.css" rel="stylesheet" integrity="sha384-EVSTQN3/azprG1Anm3QDgpJLIm9Nao0Yz1ztcQTwFspd3yD65VohhpuuCOmLASjC" crossorigin="anonymous">
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<script src="https://cdn.jsdelivr.net/npm/[email protected]/dist/js/bootstrap.bundle.min.js" integrity="sha384-MrcW6ZMFYlzcLA8Nl+NtUVF0sA7MsXsP1UyJoMp4YLEuNSfAP+JcXn/tWtIaxVXM" crossorigin="anonymous"></script>
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</head>
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<body class="container pt-5 pb-5">
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<main>
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<!-- <h1>Module 5</h1>
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<p class="fs-5 col-md-8">Here I implement a simulation genetic drift with natural selection.</p>
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<div class="col-md-6">
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<h2>Tech used projects</h2>
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<p>Here are some libraries used in this module</p>
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<ul class="icon-list">
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<li><a href="https://getbootstrap.com/">Bootstrap</a></li>
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<li><a href="https://www.chartjs.org/">Chart Js</a></li>
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</ul>
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</div>
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<div class="mb-5">
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<a href="https://github.com/techboy-coder/nature-in-code" class="btn btn-primary btn-lg px-4">Other examples made by me</a>
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</div> -->
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<hr>
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</main>
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<!-- <form action="" id="input">
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<label for="samples">Number of samples</label>
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<input type="number" name="samples" id="samples" placeholder="100" value="100">
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<label for="generations">Number of generations</label>
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<input type="number" name="generations" id="generations" placeholder="100" value="100">
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<label for="a1">Frequency of a1 (between 1 and 0; a2 = 1-a1) </label>
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<input type="number" name="a1" id="a1" placeholder="0.5" value="0.3" step="0.0001">
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</form> -->
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<!-- <button type="button" onclick="app();">Run Simulation</button> -->
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<canvas id="myChart"></canvas>
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<script src="app.js"></script>
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</body>
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</html>

‎Module 5/notes.md

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- Individual can only mate with partner in distance d on a N x M Grid
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- Calculate Probs of Alleles variations
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- Repeat for g generations

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