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CITATION.cff
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cff-version: "1.2.0"
title: >-
TAXPASTA: TAXonomic Profile Aggregation and
STAndardisation
message: >-
If you use this software, please cite our article in the
Journal of Open Source Software.
doi: 10.5281/zenodo.8105840
authors:
- given-names: Moritz E.
family-names: Beber
affiliation: "Unseen Bio ApS, Copenhagen, Denmark"
orcid: "https://orcid.org/0000-0003-2406-1978"
- given-names: Maxime
family-names: Borry
affiliation: >-
Microbiome Sciences Group, Department of
Archaeogenetics, Max Planck Institute for Evolutionary
Anthropology, Leipzig, Germany
orcid: "https://orcid.org/0000-0001-9140-7559"
- given-names: Sofia
family-names: Stamouli
orcid: "https://orcid.org/0009-0006-0893-3771"
affiliation: >-
Department of Microbiology, Tumor and Cell Biology,
Karolinska Institute, Solna, Sweden
- given-names: James A.
family-names: Fellows Yates
orcid: "https://orcid.org/0000-0001-5585-6277"
affiliation: >-
Microbiome Sciences Group, Department of
Archaeogenetics, Max Planck Institute for Evolutionary
Anthropology, Leipzig, Germany
contact:
- family-names: Beber
given-names: Moritz E.
orcid: "https://orcid.org/0000-0003-2406-1978"
repository-code: "https://github.com/taxprofiler/taxpasta"
url: "https://taxpasta.readthedocs.io/"
repository-artifact: "https://zenodo.org/record/8105840"
preferred-citation:
authors:
- family-names: Beber
given-names: Moritz E.
orcid: "https://orcid.org/0000-0003-2406-1978"
- family-names: Borry
given-names: Maxime
orcid: "https://orcid.org/0000-0001-9140-7559"
- family-names: Stamouli
given-names: Sofia
orcid: "https://orcid.org/0009-0006-0893-3771"
- family-names: Fellows Yates
given-names: James A.
orcid: "https://orcid.org/0000-0001-5585-6277"
date-published: 2023-07-11
doi: 10.21105/joss.05627
issn: 2475-9066
issue: 87
journal: Journal of Open Source Software
publisher:
name: Open Journals
start: 5627
title: "TAXPASTA: TAXonomic Profile Aggregation and STAndardisation"
type: article
url: "https://joss.theoj.org/papers/10.21105/joss.05627"
volume: 8
keywords:
- bioinformatics
- metagenomics
- profiling
- classification
- standardisation
- taxonomy
- Python
license: Apache-2.0