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add fastp dependency
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README.md

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@@ -30,7 +30,7 @@ We are working on simplifying the install, ie getting on Pypi and bioconda. Cur
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```
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conda create -n aaftf -c bioconda "python>=3.6" bbmap trimmomatic bowtie2 bwa pilon sourmash \
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blast minimap2 spades megahit novoplasty biopython
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blast minimap2 spades megahit novoplasty biopython fastp
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```
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And then install this repo with git/pip:
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```
@@ -74,7 +74,7 @@ usage: AAFTF trim [-h] [-q] [-o BASENAME] [-c cpus] [-ml MINLEN] -l LEFT
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[--trimmomatic_slidingwindow TRIMMOMATIC_SLIDINGWINDOW]
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[--trimmomatic_quality TRIMMOMATIC_QUALITY]
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This comamnd trims reads in FASTQ format to remove low quality reads and trim
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This command trims reads in FASTQ format to remove low quality reads and trim
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adaptor sequences
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optional arguments:

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