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README.md

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[![Docker Build](https://github.com/RealPaiLab/netDx/actions/workflows/push-docker.yml/badge.svg)](https://github.com/RealPaiLab/netDx/actions/workflows/push-docker.yml)
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[![R CMD check bioc](https://github.com/RealPaiLab/netDx/actions/workflows/check-bioc.yml/badge.svg)](https://github.com/RealPaiLab/netDx/actions/workflows/check-bioc.yml)
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## Project Statement
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netDx is for biomedical researchers who want to integrate multi-modal patient data to predict outcome or patient subtype. netDx builds interpretable machine-learning patient classifiers. Unlike standard machine-learning tools, netDx allows modeling of user-defined biological groups as input features; examples include pathways and co-regulated elements. In addition to patient classification, top-scoring features provide mechanistic insight, helping drive hypothesis generation for downstream experiments. netDx currently provides native support for pathway-level features but can be generalized to any user-defined data type and grouping.
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netDx is for biomedical researchers who want to integrate multi-modal patient data to predict outcome or patient subtype.
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netDx builds interpretable machine-learning patient classifiers. Unlike standard machine-learning tools, netDx allows modeling of user-defined biological groups as input features; examples include pathways and co-regulated elements. In addition to patient classification, top-scoring features provide mechanistic insight, helping drive hypothesis generation for downstream experiments. netDx currently provides native support for pathway-level features but can be generalized to any user-defined data type and grouping.
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## Install
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