Resubmission

This package has been submitted previously (2023, v0.7.1) and was removed from CRAN due to several issues, which have been addressed now.

Issues

fixed DESCRIPTION abstract, added quotation marks for package names etc
examples that are running >5 sec were wrapped in /donttest{} instead of /dontrun{}
example in ggcoverage.Rd does not contain out-commented code as stated by the reviewer
changing of graphical parameters using par(mfrow=c(2,2)) were removed from vignette
however the package does not contain any par() statement in any of the functions (supposedly R/geom_base.R) as stated by the reviewer

We have substantially removed the size of test files for the examples, reducing overall package size from ~30 Mb to only ~6 Mb. A further reduction was not possible as the package contains examples for many different NGS file types.
Examples were reduced to run in shorter time or excluded from running at all. Please note that the 5 sec threshold feels very arbitrary and heavily depends on the test environment -- this package never exceeds the threshold when tested locally on a 3 year old average laptop, or in 3 different github actions workflows, but regularly fails on the CRAN server.

0 errors | 0 warnings | 1 note

There was 1 NOTE:

installed size is  5.8Mb
  sub-directories of 1Mb or more:
    doc       1.6Mb
    extdata   3.0Mb