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IMHO we need an shortcut/function to access the colnames of the colData slot.
For the Biobase::ExpressionSet or MSnbase::MSnSet this is fvarLabel (featureData slot).
Any suggestions for a good name?
Are our colData really featureData? If that's the case I would create an alias featureData for colData and would use fvarLabels for colnames(colData(tds)).
IMHO the features of an TopDownSet are the fragments so neither of the typical Biobase::phenoData nor Biobase::featureData fits.
The text was updated successfully, but these errors were encountered:
IMHO we need an shortcut/function to access the
colnames
of thecolData
slot.For the
Biobase::ExpressionSet
orMSnbase::MSnSet
this isfvarLabel
(featureData
slot).Any suggestions for a good name?
Are our
colData
reallyfeatureData
? If that's the case I would create an aliasfeatureData
forcolData
and would usefvarLabels
forcolnames(colData(tds))
.IMHO the features of an
TopDownSet
are the fragments so neither of the typicalBiobase::phenoData
norBiobase::featureData
fits.The text was updated successfully, but these errors were encountered: