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<!DOCTYPE html>
<html lang="en">
<head>
<title>Scholarly Markdown</title>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="keywords" content="" />
<!-- RDFa Metadata (in DublinCore) -->
<meta property="dc:title" content="Scholarly Markdown" />
<meta property="dc:format" content="text/html" />
<meta property="dc:language" content="en" />
<meta property="dc:identifier" content="/index.html" />
<meta property="dc:rights" content="CC-BY-NC" />
<meta property="dc:source" content="Scholarly Markdown" />
<meta property="dc:subject" content="Scholarly Communication" />
<meta property="dc:type" content="website" />
<!-- Google Scholar Metadata -->
<meta name="citation_title" content="Scholarly Markdown"/>
<meta name="citation_journal_title" content="Scholarly Markdown"/>
<link rel="alternate" type="application/rss+xml" title="Scholarly Markdown" href="/rss.xml" />
<link rel="alternate" type="application/atom+xml" title="Scholarly Markdown" href="/atom.xml" />
<!-- Enable responsive viewport -->
<meta name="viewport" content="width=device-width, initial-scale=1">
<!-- Le HTML5 shim, for IE6-8 support of HTML elements -->
<!--[if lt IE 9]>
<script src="http://html5shim.googlecode.com/svn/trunk/html5.js"></script>
<![endif]-->
<!-- CSS -->
<link rel="stylesheet" href="/assets/app-3a1e393ebfe3b2d895cc328b97fcdd49.css">
<link rel="stylesheet" href="/assets/jasny-bootstrap.min-29c6b484ddca96fa14a48394c0cf415b.css">
<link rel="stylesheet" href="/assets/navmenu-push-f57c8aea8e44efd42b5d7fc575383151.css">
<link rel="stylesheet" href="/assets/fluidbox-cc1b5668a8c598b1c2fcc5e15e073f33.css">
<!-- d3.js -->
<script src="//cdnjs.cloudflare.com/ajax/libs/d3/3.4.2/d3.min.js"></script>
<!-- Typekit -->
<script type="text/javascript" src="//use.typekit.net/xkl5iqp.js"></script>
<script type="text/javascript">try{Typekit.load();}catch(e){}</script>
</head>
<body>
<nav id="navmenu" class="navmenu navmenu-default navmenu-fixed-left offcanvas" role="navigation">
<a class="navmenu-brand" href="#">Scholarly Markdown</a>
<ul class="nav navmenu-nav">
<li><span class="glyphicon glyphicon-time"></span> <a href="https://github.com/scholmd/scholmd.github.io/commits/source/index.html">Version History</a></li>
<li><span class="glyphicon glyphicon-edit"></span> <a href="http://prose.io/#scholmd/scholmd.github.io/edit/source/index.html">Send Edit Request</a></li>
<li><span class="glyphicon glyphicon-home"></span> <a href="/">Home</a></li>
<li><span class="glyphicon glyphicon-info-sign"></span> <a href="/about.html">About</a></li>
<li><span class="glyphicon glyphicon-tags"></span> <a href="/tags.html">All Tags</a></li>
</ul>
</nav>
<div class="navbar navbar-default navbar-fixed-top">
<button type="button" class="navbar-toggle" data-toggle="offcanvas" data-target="#navmenu" data-canvas="body">
<span class="icon-bar"></span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
</button>
</div>
<div class="container">
<div class="row">
<div class="col-md-8 col-md-offset-2">
<div class="page-header">
<h1>Scholarly Markdown</h1>
<p>Keep it simple. Have fun.</p>
</p>
</div>
</div>
</div>
<div class="content">
<div class="row">
<div class="col-md-8 col-md-offset-2">
<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html><body>
<div class="toc">
<h2>basic_setup</h2>
<ol start="01">
<li>
<div class="toc-item">
<h3><a href="/basic_setup/what-is-scholarly-markdown.html">What is Scholarly Markdown</a></h3>
<p>
</p>
</div>
</li>
<li>
<div class="toc-item">
<h3><a href="/basic_setup/learn-markdown-in-3-minutes.html">Learn Markdown in 3 Minutes</a></h3>
<p>Markdown syntax is extremely simple and you can learn all you need to know within a few minutes.
</p>
</div>
</li>
<li>
<div class="toc-item">
<h3><a href="/basic_setup/tools-to-support-your-markdown-authoring.html">Tools to Support Your Markdown Authoring</a></h3>
<p>Markdown is automatically rendered to html GitHub but can easily be parsed into a variety of other formats including PDF and LaTex. To convert seamlessly to these formats, you’ll need a document converter. Pandoc is one such open source tool that is available on all platforms. You’ll need to install a local copy to be able to run all the examples in this repo.
</p>
</div>
</li>
</ol>
</div>
<div class="toc">
<h2>markdown_elements</h2>
<ol start="01">
<li>
<div class="toc-item">
<h3><a href="/markdown_elements/citations.html">Citations</a></h3>
<p>Citations breakout group at Markdown for Science workshop
Citations should be specified as citation keys (e.g. (???). Pandoc and Multimarkdown both support human-readable formatting for this, but use different formatting.
</p>
</div>
</li>
<li>
<div class="toc-item">
<h3><a href="/markdown_elements/tables.html">Tables</a></h3>
<p>
</p>
</div>
</li>
<li>
<div class="toc-item">
<h3><a href="/markdown_elements/figures.html">Figures</a></h3>
<p>
</p>
</div>
</li>
<li>
<div class="toc-item">
<h3><a href="/markdown_elements/math.html">Math</a></h3>
<p>MathML the “HTML for math”
The web (HTML5), ebook (epub3) and publishing (XML) standard for mathematical equations is MathML. Just like HTML, MathML can be highly verbose, so manual input is usually done using other tools. In particular, there are several serial math input formats (see below).
</p>
</div>
</li>
</ol>
</div>
<div class="toc">
<h2>advanced_formatting</h2>
<ol start="01">
<li>
<div class="toc-item">
<h3><a href="/advanced_formatting/extending-markdown.html">Extending Markdown</a></h3>
<p>Markdown is a lightweight format that does not offer built-in facilities for extension. Instead it is recommended to combine external templating tools to adapt the syntax to particular use cases, where necessary. To avoid an unnecessary inflation in the number of markdown flavors out there, it is recommended that language extensions are used sparingly.
</p>
</div>
</li>
</ol>
</div>
<div class="toc">
<h2>workshop</h2>
<ol start="01">
<li>
<div class="toc-item">
<h3><a href="/workshop/workshop.html">Workshop June 2013</a></h3>
<p>Martin Fenner and Stian Haklev organized a one day Markdown for Science workshop at the Public Library of Science HQ in San Francisco on June 8th, 2013.
</p>
</div>
</li>
</ol>
</div>
</body></html>
<div class="license">
<hr>
<div class="toc-item">
</div>
</div>
<div id="disqus_thread"></div>
<script type="text/javascript">
var disqus_developer = 1;
var disqus_shortname = 'scholmd'; // required: replace example with your forum shortname
/* * * DON'T EDIT BELOW THIS LINE * * */
(function() {
var dsq = document.createElement('script'); dsq.type = 'text/javascript'; dsq.async = true;
dsq.src = 'http://' + disqus_shortname + '.disqus.com/embed.js';
(document.getElementsByTagName('head')[0] || document.getElementsByTagName('body')[0]).appendChild(dsq);
})();
</script>
<noscript>Please enable JavaScript to view the <a href="http://disqus.com/?ref_noscript">comments powered by Disqus.</a></noscript>
<a href="http://disqus.com" class="dsq-brlink">blog comments powered by <span class="logo-disqus">Disqus</span></a>
</div>
</div>
<!-- COinS metadata (for citation managers like Zotero etc), goes in body text -->
<span
class="Z3988"
title="ctx_ver=Z39.88-2004
&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc
&rfr_id=info%3Asid%2Focoins.info%3Agenerator
&rft.title=Scholarly Markdown
&rft.creator=
&rft.date=
&rft.language=EN
&rft.rights=CC0
&rft_id=http://www.scholmd.org/index.html">
</span>
<script type="text/javascript">
var _gaq = _gaq || [];
_gaq.push(['_setAccount', 'UA-36379104-1']);
_gaq.push(['_trackPageview']);
(function() {
var ga = document.createElement('script'); ga.type = 'text/javascript'; ga.async = true;
ga.src = ('https:' == document.location.protocol ? 'https://ssl' : 'http://www') + '.google-analytics.com/ga.js';
var s = document.getElementsByTagName('script')[0]; s.parentNode.insertBefore(ga, s);
})();
</script>
</div>
</div>
<!-- jQuery -->
<script src="https://code.jquery.com/jquery-1.11.0.min.js"></script>
<script src="https://code.jquery.com/jquery-migrate-1.2.1.min.js"></script>
<script src="//js/js-yaml.min.js"></script>
<!-- Fluidbox https://github.com/terrymun/Fluidbox -->
<script src="/js/js-yaml.min.js"></script>
<script src="/js/imagesloaded.pkgd.min.js"></script>
<script src="/js/jquery.fluidbox.min.js"></script>
<script type='text/javascript'>
$(function () {
$("a").fluidbox();
});
</script>
<!-- Bootstrap -->
<script src="//netdna.bootstrapcdn.com/bootstrap/3.1.1/js/bootstrap.min.js"></script>
<script src="/js/jasny-bootstrap.min.js"></script>
<!-- MathJax -->
<script type="text/javascript" src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
</body>
</html>